| ANGIOGENES | Homo sapiens, Mus musculus, Danio rerio. | http://angiogenes.uni-frankfur... |
| antiCODE | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster. | http://bioinfo.ibp.ac.cn/ANTIC... |
| ARN | Unspecified. | http://210.27.80.93/arn/ |
| AthaMap | Arabidopsis Thaliana. | http://www.athamap.de/ |
| Autism Genetic Database | Homo sapiens. | http://wren.bcf.ku.edu/ |
| BioM2MetDisease | Unspecified. | http://www.bio-bigdata.com/Bio... |
| BmncRNAdb | Bombyx mori. | http://gene.cqu.edu.cn/BmncRNA... |
| BRAliBase | Saccharomyces cerevisiae, Escherichia coli. | http://projects.binf.ku.dk/pga... |
| CCG | Homo sapiens. | http://www.xingene.net/ccg/ |
| CCGD | Homo sapiens. | http://crdd.osdd.net/raghava/c... |
| CRW | Rattus norvegicus, Canis familiaris, Arabidopsis Thaliana, Dictyostelium discoideum, Glycine Max, Neurospora crassa and 1803 others. | http://www.rna.ccbb.utexas.edu... |
| dbDEMC | Homo sapiens. | http://159.226.118.44/dbDEMC/ |
| deepBase | Homo sapiens, Mus musculus, Gallus gallus, Ciona intestinalis, Drosophila melanogaster, Caenorhabditis elegans. | http://deepbase.sysu.edu.cn/ |
| DIANA miRPath v.2.0 | Homo sapiens, Drosophila melanogaster, Caenorhabditis elegans. | http://www.microrna.gr/miRPath... |
| DIANA-LncBase | Homo sapiens, Mus musculus. | www.microrna.gr/LncBase |
| dPORE | Homo sapiens. | http://apps.sanbi.ac.za/dpore/ |
| EpimiR | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus, Arabidopsis Thaliana. | http://210.46.85.180:8080/Epim... |
| EpimiRBase | Unspecified. | http://www.epimirbase.eu |
| ERISdb | Arabidopsis Thaliana, Glycine Max, Oryza sativa, Chlamydomonas reinhardtii, Physcomitrella patens, Selaginella moellendorffii. | http://lemur.amu.edu.pl/share/... |
| EVLncRNAs | Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans and 71 others. | http://biophy.dzu.edu.cn/EVLnc... |
| ExcellmiRDB | Homo sapiens. | http://www.excellmirdb.brfjais... |
| GEAR | Homo sapiens. | http://gear.comp-sysbio.org |
| GenomeRNAi | Homo sapiens, Drosophila melanogaste. | http://www.genomernai.org |
| GermlncRNA | Homo sapiens. | http://germlncrna.cbiit.cuhk.e... |
| HMDD | Homo sapiens. | http://202.38.126.151/hmdd/mir... |
| HNOCDB | Homo sapiens. | http://gyanxet.com/hno.html |
| IGDB.NSCLC | Homo sapiens. | http://igdb.nsclc.ibms.sinica.... |
| IntmiR | Homo sapiens, Mus musculus. | http://rgcb.res.in/intmir/ |
| LincSNP | Homo sapiens. | http://bioinfo.hrbmu.edu.cn/Li... |
| Lnc2Cancer | Homo sapiens. | http://www.bio-bigdata.com/lnc... |
| Lnc2Meth | Homo sapiens. | http://www.bio-bigdata.com/Lnc... |
| LNCat | Homo sapiens. | http://biocc.hrbmu.edu.cn/LNCa... |
| LNCediting | Homo sapiens, Mus musculus, Drosophila melanogaster, Macaca mulatta. | http://bioinfo.life.hust.edu.c... |
| LNCipedia | Homo sapiens. | http://www.lncipedia.org |
| lncRInter | Homo sapiens, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans and 9 others. | http://bioinfo.life.hust.edu.c... |
| lncRNAdb | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus and 55 others. | http://lncrnadb.com/ |
| LncRNASNP | Homo sapiens, Mus musculus. | http://bioinfo.life.hust.edu.c... |
| MDTE DB | Homo sapiens, Rattus norvegicus, Mus musculus, Gallus gallus, Bos Taurus, Monodelphis domestica. | http://bioinf.njnu.edu.cn/MDTE... |
| MeRNA | Unspecified. | http://merna.lbl.gov/ |
| microPIR | Homo sapiens. | http://www4a.biotec.or.th/micr... |
| MicroTrout | Oncorhynchus mykiss. | http://www.mennigen-lab.com/mi... |
| miR2Disease | Homo sapiens. | http://www.mir2disease.org/ |
| MIR@NT@N | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes. | http://mironton.uni.lu/ |
| miRandb | Unspecified. | http://mirandb.ir |
| miRò | Homo sapiens. | http://ferrolab.dmi.unict.it/m... |
| miRCancer | Homo sapiens. | http://mircancer.ecu.edu/ |
| miRDeathDB | Homo sapiens, Rattus norvegicus, Mus musculus, Drosophila melanogaster, Xenopus tropicalis. | http://rna-world.org/mirdeathd... |
| mirDIP | Homo sapiens, Rattus norvegicus, Mus musculus, Saccharomyces cerevisiae, Kaposi sarcoma-associated herpesvirus, Musca domestica. | http://ophid.utoronto.ca/mirDI... |
| miRdSNP | Homo sapiens. | http://mirdsnp.ccr.buffalo.edu... |
| miReg | Homo sapiens. | http://www.iioab-mireg.webs.co... |
| miREnvironment | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus and 13 others. | http://cmbi.bjmu.edu.cn/miren |
| miRHrt | Mus musculus, Danio rerio, Gallus gallus. | http://sysbio.suda.edu.cn/mirh... |
| miRNA Body Map | Homo sapiens, Rattus norvegicus, Mus musculus. | http://www.mirnabodymap.org |
| miRNASNP | Unspecified. | http://bioinfo.life.hust.edu.c... |
| miRNEST | Unspecified. | http://rhesus.amu.edu.pl/mirne... |
| miRSel | Homo sapiens, Rattus norvegicus, Mus musculus. | http://services.bio.ifi.lmu.de... |
| miRSponge | Homo sapiens, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster, Arabidopsis Thaliana. | http://www.bio-bigdata.com/miR... |
| miRTarBase | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster and 11 others. | http://mirtarbase.mbc.nctu.edu... |
| miRvar | Homo sapiens. | http://genome.igib.res.in/mirl... |
| NCG | Homo sapiens. | http://ncg.kcl.ac.uk/index.php |
| NCIR | Unspecified. | http://prion.bchs.uh.edu/bp_ty... |
| ncRNAimprint | Homo sapiens, Rattus norvegicus, Mus musculus, Macaca mulatta, Bos Taurus, Ovis aries. | http://rnaqueen.sysu.edu.cn/nc... |
| NetAge | Homo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans, Saccharomyces cerevisiae. | http://netage-project.org/ |
| NNDB | Unspecified. | http://rna.urmc.rochester.edu/... |
| NRDTD | Homo sapiens. | http://chengroup.cumt.edu.cn/N... |
| NSDNA | Homo sapiens, Rattus norvegicus, Mus musculus, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans. | http://www.bio-bigdata.net/nsd... |
| OCDB | Homo sapiens. | http://ocdb.di.univr.it |
| piRNABank | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Ornithorhynchus anatinus. | http://pirnabank.ibab.ac.in/ |
| Plant snoRNA database | Arabidopsis Thaliana, Glycine Max, Lycopersicon esculentum, Medicago truncatula, Chlamydomonas reinhardtii, Pinus taeda and 12 others. | http://bioinf.scri.sari.ac.uk/... |
| PmiRKB | Arabidopsis Thaliana, Oryza sativa. | http://bis.zju.edu.cn/pmirkb/ |
| PMRD | Arabidopsis Thaliana, Brassica rapa, Dictyostelium discoideum, Glycine Max, Medicago truncatula, Oryza sativa and 121 others. | http://bioinformatics.cau.edu.... |
| Rfam | Arabidopsis Thaliana, Brassica rapa, Glycine Max, Medicago truncatula, Oryza sativa, Vitis vinifera and 270 others. | http://rfam.sanger.ac.uk/ |
| RNAcentral | Unspecified. | http://rnacentral.org |
| RNAdb | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Bos Taurus, Pan troglodytes. | http://research.imb.uq.edu.au/... |
| RNAimmuno | Homo sapiens. | http://rnaimmuno.ibch.poznan.p... |
| SM2miR | Unspecified. | http://210.46.85.180:8080/sm2m... |
| snOPY | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus and 27 others. | http://snoopy.med.miyazaki-u.a... |
| snoRNA-LBME-db | Homo sapiens. | http://www-snorna.biotoul.fr/ |
| sRNAmap | Escherichia coli, Pectobacterium atrosepticum, Photorhabdus luminescens, Salmonella species, Serratia species, Shigella species and 9 others. | http://srnamap.mbc.nctu.edu.tw... |
| sRNATarBase | Escherichia coli, Azobacter vinelandii, Bacillus subtilis, Listeria monocytogenes, Neisseria meningitides, Prochlorococcus marinus and 10 others. | http://ccb.bmi.ac.cn/srnatarba... |
| SRPDB | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Ciona intestinalis and 539 others. | http://rnp.uthscsa.edu/rnp/SRP... |
| tasiRNAdb | Arabidopsis Thaliana, Glycine Max, Medicago truncatula, Oryza sativa, Vitis vinifera, Pinus taeda and 12 others. | http://bioinfo.jit.edu.cn/tasi... |
| Telomerase Database | Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 252 others. | http://telomerase.asu.edu/ |
| The Functional lncRNA Database | Homo sapiens, Rattus norvegicus, Mus musculus. | http://valadkhanlab.org/databa... |
| The ribonuclease P database | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Macaca mulatta, Pan troglodytes and 252 others. | http://www.mbio.ncsu.edu/rnase... |
| TransmiR | Homo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Caenorhabditis elegans, Arabidopsis Thaliana. | http://202.38.126.151/hmdd/mir... |
| VIRsiRNAdb | BK polyomavirus, Epstein-Barr virus, encephalomyocarditis virus, hepatitis A virus, Hepatitis C Virus, SARS coronavirus and 36 others. | http://crdd.osdd.net/servers/v... |
| YM500 | Homo sapiens, Mus musculus. | http://ngs.ym.edu.tw/ym500/ |
