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NRDR - The Non-coding RNA Databases Resource


Database version: 2
RNA Type: Long RNA
Overview: LincSNP 2.0 is an updated database that aims specifically to store and annotate disease-associated single nucleotide polymorphisms (SNPs) in human long noncoding RNAs (lncRNAs) and their transcription factor binding sites (TFBSs). This database attempts to bridge the gap between disease-associated SNPs and human lncRNAs to enhance our understanding of lncRNA function, particularly the potential role of lncRNAs in human disease.
Search Methods:
  • Keyword: Search by disease name, lncRNA name or SNP ID
  • Genomic Location: By using human genomic coordinates
Source: dbGaP, GAD, GWAS Central, NHGRI GWAS Catalog, PharmGKb, GWASdb, GRASP, ENSEMBL, NONCODE, LNCipedia, LncRBase, GENCODE, LD-SNP
Information Source: Experimental, In silico annotation, Literature.
Information Content: .
Reference: Ning et al. 2017. LincSNP 2.0: an updated database for linking disease-associated SNPs to human long non-coding RNAs and their TFBSs. 45(D1) D74–D78
PubmedID: 27924020.
Year: 2017
Multiple search: No
Download: Other.
Genomic Overview: No
Organism: Homo sapiens (Human).

Url: http://bioinfo.hrbmu.edu.cn/LincSNP
June 2018: Release 3.0