mirDIP

RNA Type: miRNA

Overview: microRNA Data Integration Portal (mirDIP) is a database that integrates twelve prediction datasets from different databases and tools for microRNA and target prediction. It combines the results of the application of various microRNA prediction algorithms to different microRNA target datasets in order to identify signaling-pathways associated miRNAs. It allows the user to explore all these data by filtering the information source according to particular characteristics of interest.

Search Methods:

• Keyword: search by gene symbol and miRNA name.
• TAG: search combining different datasets for microRNA targets.

Source: KEGG, Target Prediction Tools (DIANA-microT, microCosm Targets, microRNA.org, picTar, PITA, RNA22, TargetScan, Miranda), Reactome and literature.

Information Source: In silico annotation, Literature.

Information Content: Network, Regulatory network, Target gene.

Reference: Shirdel et al., 2011

PubmedID: 21364759.

Year: 2011

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Mus musculus (House Mouse), Saccharomyces cerevisiae, Kaposi sarcoma-associated herpesvirus (HHV8 ), Musca domestica, Oligochaeta (Worm ).

Url: http://ophid.utoronto.ca/mirDIP/