MIR@NT@N

RNA Type: miRNA

Overview: microRNA and Transcription Factor Analyses Network (MIR@NT@N) is a database that integrates information related to transcription factors, microRNAs and target genes extracted from public datasets. It generates networks for 12 vertebrates based on a graph approach to predict TFs acting on protein-coding or miRNA transcripts, or miRNAs acting on messenger RNAs.

Search Methods:

• Keyword: search by gene, miRNA or transcription factor name.
• TAG: search by species.

Source: In-house pipeline, PAZAR, JASPAR, miRBase, Ensembl, oPOSSUM, CpGcluster, CpGProd, MicroCosm, microRNA.org, UniHI.

Information Source: In silico annotation, Literature.

Information Content: Gene, Network, Regulatory network, Target gene, Target miRNA, Transcription Factor.

Reference: Bchec et al., 2011

PubmedID: 21375730.

Year: 2009

Multiple search: Yes

Download: Other.

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Canis familiaris (Dog), Mus musculus (House Mouse), Danio rerio (Zebrafish), Takifugu rubripes (Fugu), Gallus gallus (Chicken), Drosophila melanogaster (Common Fruit Fly), Caenorhabditis elegans, Macaca mulatta (Rhesus Monkey), Bos Taurus (Cattle), Xenopus tropicalis.

Url: http://mironton.uni.lu/