MeRNA

RNA Type: Structure

Overview: The Metal in RNA (MeRNA) is a database of metal-ion binding sites in known RNA tertiary structures. There is also information related to classification RNA motif structure, function, interaction and their relationships.

Search Methods:

• Keyword: search by PDB id, NDB id, metal ion,resolution, R value, free R-value, type of binding, distance to any RNA ligand, author name (in the primary, additional references or both), distance in Armstrong from metal ion to RNA or metal ion to water.
• TAG: search by experimental method, binding motif, authors of literature references.
• Tabular: search by PDB information in Metal ion list.

Source: Literature, PDB and NDB.

Information Source: Experimental, Literature.

Information Content: Annotation, Binding site, Chain, Ligand, Metal ion, Structure.

Reference: Stefan et al., 2006

PubmedID: 16381830.

Year: 2006

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Unspecified.

Url: http://merna.lbl.gov/