RNA Type: piRNA
Overview: piRNABank is a database of sequences and annotation information of Piwi-interacting RNAs (piRNAs), obtained from biological databases and literature.
Search Methods:
  • Similarity: query your sequence using the BLAST program.
  • Keyword: search by piRNABank ID or NCBI Accession number, gene name/symbol.
  • TAG: search by organism.
  • Genomic Location: search by chromosome location.
  • Density of ncRNAs: search by chromosome, coordinate position and by a range of piRNA densites in a cluster.
Source: NCBI, RNAdb, UCSC Genome Browser.
Information Source: In silico annotation, Literature.
Information Content: Cluster, Homology, Repeat, Sequence, Transposable Elements.
Reference: Lakshmi & Agrawal, 2008
PubmedID: 17881367.
Year: 2008
Multiple search: No
Download: Request.
Genomic Overview: No
Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Mus musculus (House Mouse), Danio rerio (Zebrafish), Drosophila melanogaster (Common Fruit Fly), Ornithorhynchus anatinus (Platypus).

Url: http://pirnabank.ibab.ac.in/
June 2018: Release 3.0