RNA Type: Structure
Overview: BRAliBase is a repository of RNA secondary structure predictions and alignment algorithms. It can be used for structure prediction, sequence alignment, similairty search, phylogenetic modelling and ncRNA gene-finding.
Search Methods:
  • Tabular: search by RNA dataset type (secondary structure, alignments, sequence etc).
Source: NMR or crystallography, Rfam sequences.
Information Source: Experimental, In silico annotation, Literature, Manual curation.
Information Content: Algorithm, Alignment, Benchmark, Folding, Homology, Phylogeny, Similarity, Structure.
Reference: Gardner et al., 2005; Gardner and Giegerich, 2004
PubmedID: 15458580, 15860779.
Year: 2005;2004
Multiple search: No
Download: FASTA, Other.
Genomic Overview: No
Organism: Saccharomyces cerevisiae, Escherichia coli.

June 2018: Release 3.0