The ribonuclease P database

RNA Type: Ribozyme

Overview: The ribonuclease P database is a repository that stores sequences, alignments, secondary structures, three-dimensional models and phylogenetic datasets of RNase P from various organisms covering different kingdoms (Bacteria, Archea and Eukarya).

Search Methods:

• Tabular: search by organism, alignments or 3D-Structures/models.

Source: "The Book P" (informal publication) and GenBank.

Information Source: In silico annotation, Literature.

Information Content: Alignment, Model, Sequence, Structure.

Reference: Brown, 1999

PubmedID: 7524025, 8594588, 9016549, 9399871, 9847214.

Year: 1999;1998;1997;1996;1994

Multiple search: No

Download: FASTA, Other.

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Mus musculus (House Mouse), Danio rerio (Zebrafish), Macaca mulatta (Rhesus Monkey), Pan troglodytes (Chimpanzee), Gorilla gorilla (Gorilla), Pongo pygmaeus (Orangutan ), Saccharomyces cerevisiae, Schizosaccharomyces pombe, Xenopus laevis, Escherichia coli, Bacillus subtilis, Prochlorococcus marinus, Pseudomonas aeruginosa and 243 others.

Url: http://www.mbio.ncsu.edu/rnasep/