RNA Type: snoRNA
Overview: snoRNA-LBME-db or snoRNABase is a database of human snoRNAs and scaRNAs, including their predicted target genes and the potential base-pairing interactions within this target. There is also secondary structure information of snoRNA, telomerase RNA and basic information on the relationship between snoRNAs, host genes, and genomic imprinting.
Search Methods:
  • Similarity: search your sequence using the BLAST program.
  • Keyword: search by name from literature, the RNA symbol and snoRNA type, length, GenBank accession number and target RNA.
  • Tabular: search by C/D or H/ACA box snoRNAs, scaRNAs, sno/scaRNA position, Human-yeast snoRNA correspondence and alignments.
Source: Literature, GenBank, UCSC Genome Browser, miRBase, Rfam, GeneLinx, GeneCards, OMIM.
Information Source: Experimental, In silico annotation, Literature.
Information Content: Alignment, Annotation, Gene, Sequence, Target.
Reference: Lestrade et al., 2006
PubmedID: 16381836.
Year: 2006
Multiple search: Yes
Download: No
Genomic Overview: Yes
Organism: Homo sapiens (Human).

June 2018: Release 3.0