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NRDR - The Non-coding RNA Databases Resource


Database version: 2016
RNA Type: Multiple classes
Overview: The BmncRNAdb (Bombyx mori non-coding RNA database) is the first version non-conding RNAs database about silkworm, Bombyx mori. It stores information from lncRNAs, systematically identified using the available silkworm RNA-seq data, public unigenes and previous studies; and microRNAs, collected from previous studies.
Search Methods:
  • Tabular: List of lncRNAs or microRNAs stored in the database
  • Similarity: BLAST searches against stored lncRNAs
  • Keyword: Search by lncRNA or microRNA ID
  • TAG: Select between lncRNAs or microRNAs
Source: RNA-seq experiments, in-house pipelines for lncRNA prediction, SilkDB, ENSEMBL, SRA, NCBI UniGene, literature, NCBI
Information Source: Experimental, In silico annotation, Literature.
Information Content: .
Reference: Zhou et al. 2016. BmncRNAdb: a comprehensive database of non-coding RNAs in the silkworm, Bombyx mori. BMC Bioinformatics. 17(1): 370.
PubmedID: 27623959.
Year: 2016
Multiple search: Yes
Download: FASTA.
Genomic Overview: No
Organism: Bombyx mori.

Url: http://gene.cqu.edu.cn/BmncRNAdb/index.php
June 2018: Release 3.0