LncRNASNP

Database version: 2

RNA Type: Long RNA

Overview: LncRNASNP is a database providing comprehensive resources of single nucleotide polymorphisms (SNPs) in human/mouse lncRNAs. It contains SNPs in lncRNAs, SNP effects on lncRNA structure, mutation in lncRNAs and lncRNA:miRNA binding.

Search Methods:

• Genomic Location: Search SNPs by genomic coordinates
• Keyword: Search by SNP ID, lncRNA ID or miRNA ID
• Tabular: Browse by disease, chromosome, mutation

Source: TCGA, Cosmic, NONCODE, FATHMM, miRBase, MiRanda, TargetScan, Pita, TAM, HMDD, LncRNADisease, NHCRI GWAS Catalog, SNAP, RNAsnp

Information Source: In silico annotation, Literature.

Information Content: .

Reference: Miao et al. 2018. lncRNASNP2: an updated database of functional SNPs and mutations in human and mouse lncRNAs. Nucleic Acids Research. 46 (D1):D276-D280.; Gong et al. 2015. lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse. Nucleic Acids Research. 43 (D1): D181-D186.

PubmedID: Not Found

Year: 2018; 2015

Multiple search: No

Download: Other.

Genomic Overview: No

Organism: Homo sapiens (Human), Mus musculus (House Mouse).

Url: http://bioinfo.life.hust.edu.cn/lncRNASNP2#!/