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NRDR - The Non-coding RNA Databases Resource


Database version: 2
RNA Type: Long RNA
Overview: LncRNASNP is a database providing comprehensive resources of single nucleotide polymorphisms (SNPs) in human/mouse lncRNAs. It contains SNPs in lncRNAs, SNP effects on lncRNA structure, mutation in lncRNAs and lncRNA:miRNA binding.
Search Methods:
  • Genomic Location: Search SNPs by genomic coordinates
  • Keyword: Search by SNP ID, lncRNA ID or miRNA ID
  • Tabular: Browse by disease, chromosome, mutation
Source: TCGA, Cosmic, NONCODE, FATHMM, miRBase, MiRanda, TargetScan, Pita, TAM, HMDD, LncRNADisease, NHCRI GWAS Catalog, SNAP, RNAsnp
Information Source: In silico annotation, Literature.
Information Content: .
Reference: Miao et al. 2018. lncRNASNP2: an updated database of functional SNPs and mutations in human and mouse lncRNAs. Nucleic Acids Research. 46 (D1):D276-D280.; Gong et al. 2015. lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse. Nucleic Acids Research. 43 (D1): D181-D186.
PubmedID: Not Found
Year: 2018; 2015
Multiple search: No
Download: Other.
Genomic Overview: No
Organism: Homo sapiens (Human), Mus musculus (House Mouse).

Url: http://bioinfo.life.hust.edu.cn/lncRNASNP2#!/
June 2018: Release 3.0