- Search Result
- Database Details
RNA Type: small RNA
Overview: The small noncoding RNA map (sRNAmap) is a database of small RNAs, their transcriptional regulators and target genes in microbial genomes. There is also information related to secondary structures, expression profiles and transcriptional start sites of these ncRNAs.
- Similarity: query your sequence using the BLAST program.
- Keyword: search by any keyword. Searches are restricted by the TAG options.
- TAG: search by species, sRNA type (e.g. regulators, targets, all), data from (database, computational, literature).
- Tabular: search by literatures records of sRNA gene, computational sRNA, expression profile
Source: EcoCyc, RegulonDB, ASAP, NONCODE, NPInter, GEO, UCSC Archeal Genome Browser, Literature.
Information Source: In silico annotation, Literature.
Information Content: Expression, Microbial genomes, Network, Sequence, Structure, Target gene, Transcription Start Site, Transcriptional Regulators.
Reference: Huang et al., 2009
Multiple search: Yes
Genomic Overview: Yes