Warning: implode(): Invalid arguments passed in /var/www/html/models/ncrnaMain.php on line 360
NRDR - The Non-coding RNA Databases Resource


Database version: 2013
RNA Type: Multiple classes
Overview: ERISdb is a database of plant splice sites and splicing signals. It currently collects information from eight species. They used in-house developed algorithms to search for splice-site associated data like splicing signals (including polypyrimidine tracts or cis-regulatory elements), U12 introns or to determine microRNA gene structures.
Search Methods:
  • Keyword: Search by species name, transcript biotype, filtering by different features
Source: ENSEMBL, SRA, RNA-seq, U12DB, literature, ClustalW, BLAST, miRBase, dbEST
Information Source: Experimental, In silico annotation, Literature.
Information Content: .
Reference: Szcześniak et al. 2013. ERISdb: a database of plant splice sites and splicing signals. Plant Cell Physiol. 54(2):e10.
PubmedID: 23299413.
Year: 2013
Multiple search: No
Download: BED, Other.
Genomic Overview: No
Organism: Arabidopsis Thaliana (Thale Cress), Glycine Max (Soybean), Oryza sativa (Rice), Chlamydomonas reinhardtii (Green Alga), Physcomitrella patens, Selaginella moellendorffii, Zea mays.

Url: http://lemur.amu.edu.pl/share/ERISdb/home.html
June 2018: Release 3.0