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- Database Details
RNA Type: Structure
Overview: The database of Non-Canonical Interactions in known RNA structures (NCIR) is a repository of the structures of RNAs in which a particular rare base pair has been found. The data include non-canonical interactions observed in published crystal and NMR structures of tRNAs, group I introns, ribozymes, RNA aptamers and synthetic oligonucleotides.
- Keyword: search by general terms, authors or journal. Searches are restricted by the TAG options.
- TAG: search by structure, chemical shift, puckers info, glycosidic conf, melting point, extra information or free energy.
- Tabular: search by base pair type, author's name or structure.
Information Source: Literature.
Information Content: Annotation, Base pair, Base Quadruples, Base Triples, Free energy, Interaction, Non-Canonical base pair, Structural Elements, Structure.
Reference: Nagaswamy et al., 2002
Multiple search: No
Genomic Overview: No