IGDB.NSCLC

RNA Type: miRNA

Overview: IGDB.NSCLC is a database of lung cancers expressed protein-coding genes and microRNAs based on different microarrays approaches. It includes lung cancer genes with somatic mutations, genomic alterations with copy number alterations (CNAs) detected by high density SNP arrays, gain or loss regions detected by arrayed comparative genome hybridization (aCGH), loss of heterozygosity data (LOH) detected by microsatellite markers, and aberrant expression of genes and miRNA detected by microarray experiments.

Search Methods:

• Keyword: search by gene name, acession number, Entrez or NCBI gene ID, markers or others free terms.
• TAG: search by different lung cancer subtypes and chromosome coordinates position or cytoband.

Source: Literature, In-house experiments, Ensembl, UCSC, HapMap, COSMIC, NCBI, HGNC, miRBase, HLungDB, National Cancer Institute, NIH Senior Health, Centers for Disease Control and Prevention, Wikipedia, National Lung Partnership, American Cancer Society (NSCLC)

Information Source: Experimental, In silico annotation, In silico annotation, Literature.

Information Content: Adenocarcinoma, Cancer, Clinical studies, Copy Number Alteration, Gene, Lung, Mutation, Patient, SNP, Squamous cell carcinoma.

Reference: Kao et al., 2012

PubmedID: 22139933.

Year: 2012

Multiple search: Yes

Download: No

Genomic Overview: Yes

Organism: Homo sapiens (Human).

Url: http://igdb.nsclc.ibms.sinica.edu.tw