List of organisms from SRPDB

A

Acinetobacter baumannii

Acinetobacter species

Actinobacillus succinogenes

Aedes aegypti

Aeropyrum pernix

Agrobacterium tumefaciens

Ajellomyces capsulatus

Alcanivorax borkumensis

Alkaliphilus metalliredigens

Anabaena variabilis

Anaplasma marginale

Anopheles gambiae

Antonospora locustae

Aplysia californica

Aquifex aeolicus

Arabidopsis Thaliana

Archaeoglobus fulgidus

Armigeres subalbatus

Arthrobacter aurescens

Arthrobacter species

Ascosphaera apis

Ashbya gossypii

Aspergillus clavatus

Aspergillus flavus

Aspergillus fumigatus

Aspergillus nidulans

Aspergillus oryzae

Aspergillus terreus

Azoarcus species

B

Babesia bigemina

Bacillus alcalophilus

Bacillus amyloliquefaciens

Bacillus anthracis

Bacillus brevis

Bacillus cereus

Bacillus cereus subsp. cytotoxis

Bacillus circulans

Bacillus clausii

Bacillus halodurans

Bacillus licheniformis

Bacillus macerans

Bacillus megaterium

Bacillus polymyxa

Bacillus pumilus

Bacillus sphaericus

Bacillus stearothermophilus

Bacillus subtilis

Bacillus thuringiensis

Bacillus thuringiensis serovar konkukian

Bartonella henselae

Bartonella quintana

Batrachochytrium dendrobatidis

Bdellovibrio bacteriovorus

Benincasa hispida

Bifidobacterium adolescentis

Bifidobacterium dentium

Bifidobacterium longum

Bifidobacterium longum subsp. longum

Blochmannia floridanus

Bordetella avium

Bordetella parapertussis

Bordetella pertussis

Borrelia afzelii

Borrelia burgdorferi

Borrelia garinii

Bos Taurus

Bradyrhizobium japonicum

Bradyrhizobium species

Branchiostoma floridae

Brassica napus

Brassica oleracea

Brevibacillus brevi

Brucella abortus

Brucella canis

Brucella melitensis

Brucella microti

Brucella ovis

Brucella suis

Brugia malayi

Buchnera aphidicola

Burkholderia ambifaria

Burkholderia cenocepacia

Burkholderia mallei

Burkholderia pseudomallei

Burkholderia thailandensis

Burkholderia vietnamiensis

C

Caenorhabditis briggsae

Caenorhabditis elegans

Caenorhabditis remanei

Callithrix jacchus

Campylobacter curvus

Campylobacter jejuni

Campylobacter jejuni subsp. doylei

Campylobacter jejuni subsp. jejuni

Candida albicans

Candida dubliniensis

Candida glabrata

Candida tropicalis

Candidatus Blochmannia pennsylvanicus

Candidatus Korarchaeum cryptofilum

Canis species

Carboxydothermus hydrogenoformans

Caulobacter crescentus

Chaetomium globosum

Chlamydia muridarum

Chlamydia trachomatis

Chlamydomonas reinhardtii

Chlamydophila caviae

Chlamydophila pneumoniae

Chlorella vulgaris

Chlorobium tepidum

Chromobacterium violaceum

Chromohalobacter salexigens

Chrysanthemum morifolium

Ciona intestinalis

Ciona savignyi

Citrus sinensis

Clavispora lusitaniae

Clostridium acetobutylicum

Clostridium beijerinckii

Clostridium botulinum

Clostridium difficile

Clostridium kluyveri

Clostridium novyi

Clostridium perfringens

Clostridium tetani

Clostridium thermocellum

Coccidioides immitis

Coccidioides posadasii

Colwellia psychrerythraea

Corynebacterium diphtheriae gravis

Corynebacterium efficiens

Corynebacterium glutamicum

Corynebacterium jeikeium

Coturnix coturnix

Coxiella burnetii

Crithidia fasciculata

Crithidia luciliae

Cryptosporidium hominis

Cryptosporidium parvum

Cupriavidus metallidurans

Cyanidioschyzon merolae

Cyanidium caldarium

Cyprinus carpio

D

Danio rerio

Danio rrerio

Dasypus novemcinctus

Debaryomyces hansenii

Dechloromonas aromatica

Deinococcus geothermalis

Deinococcus radiodurans

Desulfotalea psychrophila

Desulfovibrio vulgaris subsp. vulgaris

Desulfurococcus kamchatkensis

Dictyostelium discoideum

Drosophila ananassae

Drosophila erecta

Drosophila melanogaster

Drosophila mojavensis

Drosophila pseudoobscura

Drosophila simulans

Drosophila virilis

Drosophila willistoni

Drosophila yakuba

E

Ehrlichia canis

Eimeria tenella

Encephalitozoon cuniculi

Entamoeba dispar

Entamoeba histolytica

Entamoeba invadens

Entamoeba moshkovskii

Entamoeba terrapinae

Enterococcus faecalis

Enterococcus species

Entosiphon sulcatum

Erwinia carotovora subsp. atroseptica

Escherichia coli

Escherichia fergusonii

F

Ferroplasma acidarmanus

Fervidobacterium nodosum

Francisella tularensis subsp. holarctica

Francisella tularensis subsp. mediasiatica

Francisella tularensis subsp. novicida

Francisella tularensis subsp. tularensis

Frankia alni

Frankia species

Fugu rubripes

Fusobacterium nucleatum subsp. nucleatum

G

Galdieria sulphuraria

Gallus gallus

Gemmatimonas aurantiaca

Geobacillus kaustophilus

Geobacillus thermodenitrificans

Geobacter metallireducens

Geobacter sulfurreducens

Geobacter uraniumreducens

Giardia lamblia

Gibberella moniliformis

Gibberella zeae

Gloeobacter violaceus

Gluconobacter oxydans

Gracilaria tenuistipitata

Guillardia theta plastid

Gynura aurantiaca

H

Haemophilus ducreyi

Haemophilus ducreyil

Haemophilus influenzae

Haemophilus somnus

Hahella chejuensis

Haloarcula marismortui

Halobacterium halobium

Halobacterium salinarum

Halobacterium species

Haloferax volcanii

Halomicrobium mukohataei

Haloquadratum walsbyi

Halorhabdus utahensis

Halorhodospira halophila

Halorubrum lacusprofundi

Helianthus annuus

Helianthus exilis

Helicobacter acinonychis

Helicobacter hepaticus

Helicobacter pylori

Histoplasma capsulatum

Homo sapiens

Humulus japonicus

Humulus lupulus

Hyperthermus butylicus

Hypocrea jecorina

I

Idiomarina loihiensis

Ignicoccus hospitalis

K

Kineococcus radiotolerans

Klebsiella pneumoniae

Klebsiella pneumoniae subsp. pneumoniae

Klebsiella variicola

Kluyveromyces lactis

Kluyveromyces waltii

Kluyveromyces yarrowia

L

Lactobacillus acidophilus

Lactobacillus brevis

Lactobacillus casei

Lactobacillus delbrueckii subsp. bulgaricus

Lactobacillus delbrueckii subsp. lactis

Lactobacillus gasseri

Lactobacillus johnsonii

Lactobacillus plantarum

Lactobacillus salivarius subsp. salivarius

Lactococcus lactis subsp. cremoris

Lactococcus lactis subsp. lactis

Legionella pneumophila

Legionella pneumophila subsp. pneumophila

Leifsonia xyli subsp. xyli

Leishmania aethiopica

Leishmania braziliensis

Leishmania donovani

Leishmania guyanensis

Leishmania infantum

Leishmania major

Leishmania tropica

Lemur catta

Leptomonas collosoma

Listeria innocua

Listeria monocytogenes

Listeria welshimeri serovar

Lodderomyces elongisporus

Lottia gigantea

Lotus corniculatus

Lotus japonicus

Loxodonta africana

Lycopersicon esculentum

M

Macaca mulatta

Mannheimia succiniciproducens

Marinobacter aquaeolei

Medicago truncatula

Mesoplasma florum

Mesorhizobium loti

Mesostigma viride

Metallosphaera sedula

Methanobacterium thermoautotrophicum

Methanocaldococcus fervens

Methanocaldococcus jannaschii

Methanocaldococcus vulcanius

Methanococcoides burtonii

Methanococcus aeolicus Nankai

Methanococcus maripaludis

Methanococcus vannielii

Methanococcus voltae

Methanoculleus marisnigri

Methanopyrus kandleri

Methanosaeta thermophila

Methanosarcina acetivorans

Methanosarcina barkeri

Methanosarcina mazei

Methanothermobacter thermautotrophicus

Methanothermus fervidus

Methylobacillus flagellatus

Methylococcus capsulatus

Micrococcus lysodeikticus

Monodelphis domestica

Monosiga brevicollis

Moorella thermoacetica

Mus musculus

Mycobacterium avium

Mycobacterium avium subsp. paratuberculosis

Mycobacterium bovis

Mycobacterium bovis subsp. bovis

Mycobacterium gilvum

Mycobacterium marinum

Mycobacterium smegmatis

Mycobacterium species

Mycobacterium tuberculosis

Mycobacterium ulcerans

Mycoplasma capricolum

Mycoplasma capricolum subsp. capricolum

Mycoplasma gallisepticum

Mycoplasma hyopneumoniae

Mycoplasma mobile

Mycoplasma mycoides subsp. capri

Mycoplasma mycoides subsp. mycoides

Mycoplasma penetrans

Mycoplasma pneumoniae

Mycoplasma pulmonis

Mycoplasma synoviae

N

Naegleria gruberi

Natronomonas pharaonis

Nectria haematococca

Neisseria gonorrhoeae

Neisseria meningitidis

Nematostella vectensis

Neosartorya fischeri

Nephroselmis olivacea

Neurospora crassa

Nitrobacter hamburgensis

Nitrobacter winogradskyi

Nitrosomonas europaea

Nitrosomonas eutropha

Nocardia farcinica

O

Oceanobacillus iheyensis

Ochrobactrum anthropi

Odontella sinensis

Oligotropha carboxidovorans

Onchocerca volvulus

Ornithorhynchus anatinus

Oryctolagus cuniculus

Oryza sativa

Oryza sativa subsp. japonica

Ostreococcus tauri

Oxytricha trifallax

P

Pan troglodytes

Paracoccidioides brasiliensis

Pasteurella multocida subsp. multocida

Pediococcus pentosaceus

Perkinsus marinus

Persea americana

Phaeosphaeria nodorum

Phakopsora meibomiae

Phakopsora pachyrhizi

Photobacterium profundum

Photorhabdus luminescens subsp. laumondii

Phytophthora infestans

Phytophthora ramorum

Phytophthora sojae

Pichia guilliermondii

Pichia stipitis

Picrophilus torridus

Plasmodium berghei

Plasmodium chabaudi

Plasmodium falciparum

Plasmodium gallinaceum

Plasmodium knowlesi

Plasmodium reichenowi

Plasmodium vivax

Plasmodium yoelii

Podospora anserina

Populus balsamifera

Populus tremula

Porphyra purpurea

Porphyra yezoensis

Pristionchus pacificus

Prochlorococcus marinus

Prochlorococcus marinus subsp. marinus

Prochlorococcus species

Propionibacterium acnes

Prunus armeniaca

Pseudomonas aeruginosa

Pseudomonas entomophila

Pseudomonas fluorescens

Pseudomonas mendocina

Pseudomonas putida

Pseudomonas stutzeri

Pseudomonas syringae pv. phaseolicola

Pseudomonas syringae pv. syringae

Psychrobacter arcticus

Psychrobacter cryohalolentis

Psychrobacter sp. PRwf

Pyrobaculum aerophilum

Pyrobaculum arsenaticum

Pyrobaculum calidifontis

Pyrobaculum islandicum

Pyrococcus abyssi

Pyrococcus furiosus

Pyrococcus horikoshii

Pyrodictium occultum

R

Ralstonia eutropha

Ralstonia pickettii

Ralstonia solanacearum

Rattus norvegicus

Rhizobium etli

Rhizobium leguminosarum

Rhizobium species

Rhizopus oryzae

Rhodococcus jostii

Rhodococcus opacus

Rhodopirellula baltica

Rhodopseudomonas palustris

Rickettsia africae

Rickettsia conorii

Rickettsia felis

Rickettsia peacockii

Rickettsia prowazekii

Rickettsia rickettsii

Rickettsia typhi

Ruegeria pomeroyi

S

Saccharomyces bayanus

Saccharomyces castellii

Saccharomyces cerevisiae

Saccharomyces kluyveri

Saccharomyces kudriavzevii

Saccharomyces mikatae

Saccharomyces paradoxus

Saccharophagus degradans

Saccharopolyspora erythraea

Salinispora tropica

Salmonella enterica subsp. enterica serovar

Schistosoma mansoni

Schizosaccharomyces japonicus

Schizosaccharomyces pombe

Schmidtea mediterranea

Sclerotinia sclerotiorum

Senecio cruentus

Shewanella baltica

Shewanella loihica

Shewanella oneidensis

Shewanella putrefaciens

Shewanella species

Shigella boydii

Shigella dysenteriae

Shigella flexneri

Shigella sonnei

Silicibacter species

Sinorhizobium medicae

Sinorhizobium meliloti

Sodalis glossinidius

Solanum tuberosum

Solenostemon scutellarioides

Sorghum bicolor

Sphingopyxis alaskensis

Spraguea lophii

Staphylococcus aureus

Staphylococcus aureus subsp. aureus

Staphylococcus epidermidis

Staphylococcus haemolyticus

Staphylococcus saprophyticus subsp. saprophyticus

Staphylothermus marinus

Streptococcus agalactiae

Streptococcus dysgalactiae subsp. equisimilis

Streptococcus mutans

Streptococcus pneumoniae

Streptococcus pyogenes

Streptococcus sanguinis

Streptococcus suis

Streptococcus thermophilus

Streptomyces avermitilis

Streptomyces coelicolor

Streptomyces lividans

Strongylocentrotus purpuratus

Sulfolobus acidocaldarius

Sulfolobus islandicus

Sulfolobus solfataricus

Sulfolobus tokodaii

Sus scrofa

Synechococcus elongatus

Synechococcus species

Synechocystis species

Syntrophomonas wolfei subsp. wolfei

T

Taeniopygia guttata

Tetrahymena rostrata

Tetrahymena thermophila

Tetraodon nigroviridis

Thalassiosira pseudonana

Thauera species

Theileria annulata

Theileria parva

Thermoanaerobacter tengcongensis

Thermobifida fusca

Thermococcus celer

Thermococcus gammatolerans

Thermococcus kodakarensis

Thermococcus onnurineus

Thermococcus sibiricus

Thermoplasma acidophilum

Thermoplasma volcanium

Thermoproteus neutrophilus

Thermosipho melanesiensis

Thermosynechococcus elongatus

Thermotoga maritima

Thermotoga petrophila

Thermus thermophilus

Thiobacillus denitrificans

Toxoplasma gondii

Treponema denticola

Treponema pallidum subsp. pallidum

Trichinella spiralis

Trichoderma reesei

Trichomonas vaginalis

Triticum aestivum

Tropheryma whipplei

Trypanosoma brucei

Trypanosoma congolense

Trypanosoma vivax

U

Uncinocarpus reesii

Uncultured prokaryote

Ureaplasma parvum serovar

V

Vibrio cholerae

Vibrio fischeri

Vibrio harveyi

Vibrio parahaemolyticus

Vibrio vulnificus

Volvox carteri

W

Wolbachia endosymbiont

X

Xanthomonas campestris pv. campestris

Xanthomonas campestris pv. vesicatoria

Xanthomonas euvesicatoria

Xanthomonas oryzae pv. oryzae

Xenopus laevis

Xylella fastidiosa

Xylella fastidiosa Temecula

Y

Yarrowia lipolytica

Yersinia pestis

Yersinia pseudotuberculosis

Z

Zea mays

Zygosaccharomyces rouxii

Zymomonas mobilis

Zymomonas mobilis subsp. mobilis