List of organisms from NAPP

A

Acaryochloris marina

Acetobacter pasteurianus

Acholeplasma laidlawii

Acidaminococcus fermentans

Acidimicrobium ferrooxidans

Acidiphilium cryptum

Acidithiobacillus ferrooxidans

Acidobacterium capsulatum

Acidothermus cellulolyticus

Acidovorax avenae citrulli

Acidovorax JS42

Aciduliprofundum boonei

Acinetobacter baumannii

Acinetobacter sp.

Actinobacillus pleuropneumoniae

Actinobacillus succinogenes

Actinosynnema mirum

Aeromonas hydrophila

Aeromonas salmonicida

Aeropyrum pernix

Aggregatibacter actinomycetemcomitans

Aggregatibacter aphrophilus

Agrobacterium radiobacter

Agrobacterium tumefaciens

Agrobacterium vitis

Akkermansia muciniphila

Alcanivorax borkumensis

Alicyclobacillus acidocaldarius

Aliivibrio salmonicida

Alkalilimnicola ehrlichei

Alkaliphilus metalliredigens

Alkaliphilus oremlandii

Allochromatium vinosum

Alteromonas macleodii

Ammonifex degensii

Anabaena variabilis

Anaerocellum thermophilum

Anaerococcus prevotii

Anaeromyxobacter dehalogenans

Anaplasma centrale

Anaplasma marginale

Anaplasma phagocytophilum

Anoxybacillus flavithermus

Aquifex aeolicus

Archaeoglobus fulgidus

Archaeoglobus profundus

Arcobacter butzleri RM4018

Aromatoleum aromaticum EbN1

Arthrobacter aurescens

Arthrobacter chlorophenolicus

Arthrobacter FB24

Atopobium parvulum

Azoarcus BH72

Azorhizobium caulinodans

Azospirillum B510

Azotobacter vinelandii

B

Bacillus amyloliquefaciens

Bacillus anthracis

Bacillus anthracis str Sterne

Bacillus cereus

Bacillus clausii

Bacillus halodurans

Bacillus licheniformis

Bacillus pseudofirmus

Bacillus pumilus

Bacillus subtilis

Bacillus thuringiensis Al Hakam

Bacillus thuringiensis konkukian

Bacillus weihenstephanensis

Bacteroides fragilis

Bacteroides thetaiotaomicron

Bacteroides vulgatus

Bartonella bacilliformis

Bartonella grahamii

Bartonella henselae

Bartonella quintana

Bartonella tribocorum

Baumannia cicadellinicola Homalodisca coagulata

Bdellovibrio bacteriovorus

Beijerinckia indica

Beutenbergia cavernae

Bifidobacterium adolescentis

Bifidobacterium animalis lactis

Bifidobacterium dentium

Bifidobacterium longum

Bifidobacterium longum DJO10A

Bifidobacterium longum infantis

Blattabacterium Blattella germanica

Blattabacterium Periplaneta americana

Bordetella avium

Bordetella bronchiseptica

Bordetella parapertussis

Bordetella pertussis

Bordetella petrii

Borrelia afzelii

Borrelia burgdorferi

Borrelia duttonii

Borrelia garinii

Borrelia hermsii

Borrelia recurrentis

Borrelia turicatae

Brachybacterium faecium

Bradyrhizobium BTAi1

Bradyrhizobium japonicum

Bradyrhizobium ORS278

Brevibacillus brevis

Brucella abortus

Brucella canis

Brucella melitensis

Brucella microti

Brucella ovis

Brucella suis

Brugia malayi

Burkholderia ambifaria

Burkholderia cenocepacia

Burkholderia glumae

Burkholderia mallei

Burkholderia multivorans

Burkholderia phymatum

Burkholderia phytofirmans

Burkholderia pseudomallei

Burkholderia thailandensi

Burkholderia vietnamiensis

Burkholderia xenovorans

C

Caldicellulosiruptor saccharolyticus

Caldivirga maquilingensis

Campylobacter concisus

Campylobacter curvus

Campylobacter fetus

Campylobacter hominis

Campylobacter jejuni

Campylobacter lari

Candidatus Accumulibacter phosphatis clade

Candidatus Amoebophilus asiaticus

Candidatus Azobacteroides pseudotrichonymphae

Candidatus Blochmannia floridanus

Candidatus Blochmannia pennsylvanicus

Candidatus Desulfococcus oleovorans

Candidatus Desulforudis audaxviator

Candidatus Hamiltonella defensa

Candidatus Hodgkinia cicadicola

Candidatus Korarchaeum cryptofilum

Candidatus Koribacter versatilis

Candidatus Liberibacter asiaticus

Candidatus Methanoregula boonei

Candidatus Methanosphaerula palustris

Candidatus Pelagibacter ubique

Candidatus Ruthia magnifica

Candidatus Vesicomyosocius okutanii

Capnocytophaga ochracea

Carboxydothermus hydrogenoformans

Catenulispora acidiphila

Caulobacter crescentus

Cellvibrio japonicus

Chitinophaga pinensis

Chlamydia muridarum

Chlamydia trachomatis

Chlamydophila abortus

Chlamydophila caviae

Chlamydophila felis

Chlamydophila pneumoniae

Chlorobaculum parvum

Chlorobium chlorochromatii

Chlorobium limicola

Chlorobium luteolum

Chlorobium phaeobacteroides

Chlorobium tepidum

Chloroflexus aggregans

Chloroflexus aurantiacus

Chloroherpeton thalassium

Chromobacterium violaceum

Chromohalobacter salexigens

Citrobacter koseri

Citrobacter rodentium

Clavibacter michiganensis

Clostridiales genomosp

Clostridium acetobutylicum

Clostridium beijerinckii

Clostridium botulinum

Clostridium cellulolyticum

Clostridium difficile

Clostridium kluyveri

Clostridium novyi

Clostridium perfringens

Clostridium phytofermentans

Clostridium tetani

Clostridium thermocellum

Colwellia psychrerythraea

Comamonas testosteroni

Conexibacter woesei

Coprothermobacter proteolyticus

Corynebacterium aurimucosum

Corynebacterium diphtheriae

Corynebacterium efficiens

Corynebacterium glutamicum

Corynebacterium jeikeium

Corynebacterium kroppenstedtii

Corynebacterium urealyticum

Coxiella burnetii

Cronobacter turicensis

Cryptobacterium curtum

Culex quinquefasciatus

Cupriavidus metallidurans

Cupriavidus taiwanensis

Cyanobacteria bacterium Yellowstone

cyanobacterium UCYN

Cyanothece

Cytophaga hutchinsonii

D

Dechloromonas aromatica

Deferribacter desulfuricans

Dehalococcoides BAV1

Dehalococcoides CBDB1

Dehalococcoides ethenogenes

Dehalococcoides GT

Deinococcus deserti

Deinococcus geothermalis

Deinococcus radiodurans

Delftia acidovorans

Denitrovibrio acetiphilus

Desulfatibacillum alkenivorans

Desulfitobacterium hafniense

Desulfobacterium autotrophicum

Desulfohalobium retbaense

Desulfomicrobium baculatum

Desulfotalea psychrophila

Desulfotomaculum acetoxidans

Desulfotomaculum reducens

Desulfovibrio desulfuricans

Desulfovibrio magneticus

Desulfovibrio salexigens

Desulfovibrio vulgaris

Desulfurococcus kamchatkensis

Diaphorobacter TPSY

Dichelobacter nodosus

Dickeya dadantii

Dickeya zeae

Dictyoglomus thermophilum

Dictyoglomus turgidum

Dinoroseobacter shibae

Drosophila melanogaster

Dyadobacter fermentans

E

Edwardsiella ictaluri

Edwardsiella tarda

Eggerthella lenta

Ehrlichia canis

Ehrlichia chaffeensis

Ehrlichia ruminantium

Elusimicrobium minutum

Enterobacter sakazakii

Enterococcus faecalis

Erwinia amylovora

Erwinia carotovora atroseptica

Erwinia pyrifoliae

Erwinia tasmaniensis

Erythrobacter litoralis

Escherichia coli

Escherichia fergusonii

Eubacterium eligens

Eubacterium rectale

Exiguobacterium AT1b

Exiguobacterium sibiricum

F

Fervidobacterium nodosum

Fibrobacter succinogenes

Finegoldia magna

Flavobacteriaceae bacterium

Flavobacterium johnsoniae

Flavobacterium psychrophilum

Francisella philomiragia

Francisella tularensis holarctica

Francisella tularensis mediasiatica

Francisella tularensis novicida

Francisella tularensis tularensis

Frankia alni

Frankia CcI3

Frankia EAN1pec

Fusobacterium nucleatum

G

Gardnerella vaginalis

Gemmatimonas aurantiaca

Geobacillus kaustophilus

Geobacillus thermodenitrificans

Geobacillus WCH70

Geobacillus Y412MC10

Geobacillus Y412MC61

Geobacter bemidjiensis

Geobacter lovleyi

Geobacter metallireducens

Geobacter sulfurreducens

Geobacter uraniumreducens

Geodermatophilus obscurus

Gloeobacter violaceus

Gluconacetobacter diazotrophicus

Gluconobacter oxydans

Gordonia bronchialis

Gramella forsetii

Granulobacter bethesdensis

H

Haemophilus ducreyi

Haemophilus influenzae

Haemophilus parasuis

Haemophilus somnus

Hahella chejuensis

Haliangium ochraceum

Haloarcula marismortui

Halobacterium salinarum

Haloferax volcanii

Halomicrobium mukohataei

Haloquadratum walsbyi

Halorhabdus utahensis

Halorhodospira halophila

Halorubrum lacusprofundi

Haloterrigena turkmenica

Halothermothrix orenii

Halothiobacillus neapolitanus

Helicobacter acinonychis Sheeba

Helicobacter hepaticus

Helicobacter mustelae

Helicobacter pylori

Heliobacterium modesticaldum

Herminiimonas arsenicoxydans

Herpetosiphon aurantiacus

Hirschia baltica

Hydrogenobacter thermophilus

Hydrogenobaculum Y04AAS1

Hyperthermus butylicus

Hyphomonas neptunium

I

Idiomarina loihiensis

Ignicoccus hospitalis

J

Jannaschia CCS1

Janthinobacterium Marseille

Jonesia denitrificans

K

Kangiella koreensis

Kineococcus radiotolerans

Klebsiella pneumoniae

Klebsiella variicola

Kocuria rhizophila

Kosmotoga olearia

Kribbella flavida

Kytococcus sedentarius

L

Lactobacillus acidophilus

Lactobacillus brevis

Lactobacillus casei

Lactobacillus delbrueckii bulgaricus

Lactobacillus fermentum

Lactobacillus gasseri

Lactobacillus helveticus

Lactobacillus johnsonii

Lactobacillus plantarum

Lactobacillus reuteri

Lactobacillus rhamnosus

Lactobacillus sakei

Lactobacillus salivarius

Lactococcus lactis

Lactococcus lactis cremoris

Lactococcus lactis KF147

Laribacter hongkongensis

Lawsonia intracellularis

Legionella longbeachae

Legionella pneumophila

Leifsonia xyli

Leptospira biflexa serovar Patoc Patoc

Leptospira borgpetersenii serovar Hardjo-bovis

Leptospira interrogans serovar

Leptospira interrogans serovar Copenhageni

Leptothrix cholodnii

Leptotrichia buccalis

Leuconostoc citreum

Leuconostoc mesenteroides

Listeria innocua

Listeria monocytogenes

Listeria seeligeri serovar

Listeria welshimeri serovar

Lysinibacillus sphaericus

M

Macrococcus caseolyticus

Magnetococcus MC-1

Magnetospirillum magneticum

Mannheimia succiniciproducens

Maricaulis maris

Marinobacter aquaeolei

Marinomonas MWYL1

Meiothermus ruber

Mesoplasma florum

Mesorhizobium BNC1

Mesorhizobium loti

Metallosphaera sedula

Methanobacterium thermoautotrophicum

Methanocaldococcus fervens

Methanocaldococcus FS406

Methanocella paludicola

Methanococcoides burtonii

Methanococcus jannaschii

Methanococcus maripaludis

Methanocorpusculum labreanum

Methanopyrus kandleri

Methanosaeta thermophila

Methanosarcina acetivorans

Methanosarcina barkeri fusaro

Methanosarcina mazei

Methanospirillum hungatei

Methylacidiphilum infernorum

Methylibium petroleiphilum

Methylobacillus flagellatus

Methylobacterium chloromethanicum

Methylobacterium extorquens

Methylobacterium nodulans

Methylobacterium populi

Methylobacterium radiotolerans

Methylocella silvestris

Methylococcus capsulatus Bath

Methylotenera mobilis

Methylovorus SIP3

Micrococcus luteus

Microcystis aeruginosa

Moorella thermoacetica

Mycobacterium abscessus

Mycobacterium avium paratuberculosis

Mycobacterium bovis BCG Pasteur 1173P2

Mycobacterium bovis BCG Tokyo

Mycobacterium gilvum PYR-GCK

Mycobacterium leprae

Mycobacterium marinum

Mycobacterium smegmatis

Mycobacterium tuberculosis

Mycobacterium ulcerans

Mycobacterium vanbaalenii

Mycoplasma agalactiae

Mycoplasma arthritidis

Mycoplasma capricolum

Mycoplasma gallisepticum

Mycoplasma genitalium

Mycoplasma mycoides

Mycoplasma penetrans

Mycoplasma pneumoniae

Mycoplasma synoviae

Myxococcus xanthus

N

Nakamurella multipartita

Nanoarchaeum equitans

Natronomonas pharaonis

Nautilia profundicola

Neisseria gonorrhoeae

Neisseria meningitidis

Neorickettsia risticii

Nitratiruptor SB155-2

Nitrobacter hamburgensis

Nitrobacter winogradskyi

Nitrosococcus halophilus

Nitrosococcus oceani

Nitrosomonas europaea

Nitrosomonas eutropha

Nitrosopumilus maritimus

Nitrosospira multiformis

Nocardia farcinica

Nocardioides

Nostoc punctiforme

Novosphingobium aromaticivorans

O

Oceanobacillus iheyensis

Ochrobactrum anthropi

Oenococcus oeni

Oligotropha carboxidovorans

Opitutus terrae

Orientia tsutsugamushi Boryong

Orientia tsutsugamushi Ikeda

P

Pantoea ananatis

Parabacteroides distasonis

Parachlamydia sp.

Paracoccus denitrificans

Parvibaculum lavamentivorans

Pasteurella multocida

Pectobacterium carotovorum

Pectobacterium wasabiae

Pediococcus pentosaceus

Pedobacter heparinus

Pelobacter carbinolicus

Pelobacter propionicus

Pelodictyon phaeoclathratiforme

Pelotomaculum thermopropionicum

Persephonella marina

Petrotoga mobilis

Phenylobacterium zucineum

Photobacterium profundum

Photorhabdus asymbiotica

Photorhabdus luminescens

Picrophilus torridus

Pirellula

Polaromonas JS666

Polaromonas naphthalenivorans

Polynucleobacter necessarius

Polynucleobacter necessarius asymbioticus

Porphyromonas gingivalis

Prochlorococcus marinus

Propionibacterium acnes

Prosthecochloris aestuarii

Prosthecochloris vibrioformis

Proteus mirabilis

Pseudoalteromonas atlantica

Pseudoalteromonas haloplanktis

Pseudomonas aeruginosa

Pseudomonas entomophila

Pseudomonas fluorescens

Pseudomonas mendocina

Pseudomonas putida

Pseudomonas stutzeri

Pseudomonas syringae phaseolicola

Pseudomonas syringae pv

Pseudomonas syringae tomato

Psychrobacter arcticum

Psychrobacter cryohalolentis

Psychrobacter PRwf-1

Psychromonas ingrahamii

Pyrobaculum aerophilum

Pyrobaculum arsenaticum

Pyrobaculum calidifontis

Pyrobaculum islandicum

Pyrococcus abyssi

Pyrococcus furiosus

Pyrococcus horikoshii

R

Ralstonia eutropha

Ralstonia pickettii

Ralstonia solanacearum

Renibacterium salmoninarum

Rhizobium etli

Rhizobium leguminosarum

Rhizobium NGR234

Rhodobacter sphaeroides

Rhodococcus erythropolis

Rhodococcus jostii

Rhodococcus opacus

Rhodoferax ferrireducens

Rhodopseudomonas palustris

Rhodospirillum centenum

Rhodospirillum rubrum

Rhodothermus marinus

Rickettsia africae

Rickettsia akari

Rickettsia bellii

Rickettsia canadensis

Rickettsia conorii

Rickettsia felis

Rickettsia massiliae

Rickettsia peacockii

Rickettsia prowazekii

Rickettsia rickettsii

Rickettsia typhi wilmington

Robiginitalea biformata

Roseiflexus castenholzii

Roseiflexus RS-1

Roseobacter denitrificans

Rothia mucilaginosa

Rubrobacter xylanophilus

Ruegeria pomeroyi

S

Saccharomonospora viridis

Saccharophagus degradans

Saccharopolyspora erythraea

Salinibacter ruber

Salinispora arenicola

Salinispora tropica

Salmonella enterica arizonae serovar

Salmonella enterica Choleraesuis

Salmonella enterica Paratypi

Salmonella enterica serovar Agona

Salmonella enterica serovar Dublin

Salmonella enterica serovar Enteritidis

Salmonella enterica serovar Gallinarum

Salmonella enterica serovar Heidelberg

Salmonella enterica serovar Newport

Salmonella enterica serovar Paratyphi

Salmonella enterica serovar Schwarzengrund

Salmonella enterica serovar Typhi

Salmonella typhi

Salmonella typhimurium

Sebaldella termitidis

Serratia proteamaculans

Shewanella amazonensis

Shewanella ANA-3

Shewanella baltica

Shewanella denitrificans

Shewanella frigidimarina

Shewanella loihica

Shewanella MR-4

Shewanella MR-7

Shewanella oneidensis

Shewanella pealeana

Shewanella piezotolerans

Shewanella putrefaciens

Shewanella sediminis

Shewanella woodyi

Shigella boydii

Shigella dysenteriae

Shigella flexneri

Shigella sonnei

Sideroxydans lithotrophicus

Silicibacter TM1040

Sinorhizobium medicae

Sinorhizobium meliloti

Sodalis glossinidius morsitans

Solibacter usitatus

Sorangium cellulosum

Sphaerobacter thermophilus

Sphingomonas wittichii

Sphingopyxis alaskensis

Spirosoma linguale

Stackebrandtia nassauensis

Staphylococcus aureus

Staphylococcus carnosus

Staphylococcus epidermidis

Staphylococcus haemolyticus

Staphylococcus lugdunensis

Staphylococcus saprophyticus

Staphylothermus marinus

Stenotrophomonas maltophilia

Streptobacillus moniliformis

Streptococcus agalactiae

Streptococcus dysgalactiae equisimilis

Streptococcus equi

Streptococcus equi zooepidemicus

Streptococcus gallolyticus

Streptococcus gordonii Challis

Streptococcus mitis

Streptococcus mutans

Streptococcus pneumoniae

Streptococcus pyogenes

Streptococcus sanguinis

Streptococcus suis

Streptococcus thermophilus

Streptococcus uberis

Streptomyces avermitilis

Streptomyces coelicolor

Streptomyces griseus

Streptomyces scabiei

Streptosporangium roseum

Sulfolobus acidocaldarius

Sulfolobus islandicus

Sulfolobus solfataricus

Sulfolobus tokodaii

Sulfurihydrogenibium azorense

Sulfurovum NBC37-1

Symbiobacterium thermophilum

Synechococcus CC9311

Synechococcus CC9605

Synechococcus CC9902

Synechococcus elongatus

Synechococcus RCC307

Synechococcus sp. WH8102

Synechocystis PCC6803

Syntrophobacter fumaroxidans MPOB

Syntrophomonas wolfei Goettingen

Syntrophus aciditrophicus

T

Teredinibacter turnerae

Thauera MZ1T

Thermanaerovibrio acidaminovorans

Thermoanaerobacter italicus

Thermoanaerobacter pseudethanolicus

Thermoanaerobacter tengcongensis

Thermoanaerobacter X514

Thermobaculum terrenum

Thermobifida fusca

Thermococcus gammatolerans

Thermococcus kodakaraensis

Thermococcus onnurineus

Thermococcus sibiricus

Thermocrinis albus

Thermodesulfovibrio yellowstonii

Thermomicrobium roseum

Thermomonospora curvata

Thermoplasma acidophilum

Thermoplasma volcanium

Thermoproteus neutrophilus

Thermosipho africanus

Thermosipho melanesiensis

Thermosynechococcus elongatus

Thermotoga lettingae

Thermotoga maritima

Thermotoga neapolitana

Thermus thermophilus

Thioalkalivibrio

Thiobacillus denitrificans

Thiomicrospira crunogena

Thiomicrospira denitrificans

Tolumonas auensis

Treponema denticola

Treponema pallidum

Trichodesmium erythraeum

Tropheryma whipplei

u

uncultured methanogenic archaeon

uncultured Termite

Ureaplasma parvum serovar

Ureaplasma urealyticum serovar

V

Variovorax paradoxus

Verminephrobacter eiseniae

Vibrio cholerae

Vibrio Ex25

Vibrio fischeri

Vibrio harveyi

Vibrio parahaemolyticus

Vibrio splendidus

Vibrio vulnificus

W

Wolbachia

Wolinella succinogenes

X

Xanthobacter autotrophicus

Xanthomonas albilineans

Xanthomonas campestris

Xanthomonas campestris vesicatoria

Xanthomonas citri

Xanthomonas oryzae

Xenorhabdus bovienii

Xylanimonas cellulosilytica

Xylella fastidiosa

Y

Yersinia enterocolitica

Yersinia pestis Angola

Yersinia pestis Antiqua

Yersinia pestis biovar Microtus

Yersinia pestis CO92

Yersinia pestis KIM

Yersinia pestis Nepal516

Yersinia pestis Pestoides

Yersinia pseudotuberculosis

Z

Zymomonas mobilis