Non-coding RNA Databases Resource
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Database
Overview (Description)
Organism
Source
Information Source
Experimental
In Silico Annotation
Literature
Manual Curation
RNA Families
Multiple classes
CNE
Long RNA
miRNA
NAT
piRNA
Ribozyme
siRNA
small RNA
snoRNA
SRP RNA
Structure
TERC
Information Content
3'UTR Regions
Acceptor/Donor Site
Adenocarcinoma
Adult
Age
Algorithm
Alignment
All Kingdom
Anatomical Structure
Anatomy Information
Angle
Animal
Annotation
Antagomir
Antisense Transcript
Apoptosis
Arabidopsis
Arabidopsis Thaliana
Argonaute Sites
Associated Conservation
Autism
Autophagy
Bacterial
Base Pair
Base Quadruples
Base Triples
Benchmark
Bifunctional
Binding Site
Biological Process
Biological Signal
Biomarkers
Cancer
Cardiovascular System
Catalysis
Cell Line
Cell Location
Cell Type
Cellular Component
Cellular Process
Cereal
Chain
Chemicals
Chloroplast
Chromosomal Location
Cis-regulatory Elements
Cis/Trans
Class
Classification
Cleavage Sites
Clinical Studies
CLIP-Seq
Cluster
Comparative Analysis
Components
Computational
Condition
Conservation
Conservation Sites
Conserved Non-coding Elements
Copy Number Alteration
Copy Number Variation
Correlation
Covariance Model
Crops
Crystal Data
Crystallography
Cumulative Distribution
Database
Databases MicroRNA–cancer
Deep Sequence Data
Degradome-Seq
Design Tool
Developmental Stages
Developmentalregulators
Diagram
Dicer Processing Site
Disease
Disease-associated SNPs
Domain
Dosage Compensation
Downstream Region
Drugs
Efficacy
Embryonic
Embryos (zebrafish)
Environmental Factors
Epigenetic
EST
Eukaryota
Evidence
Evolution
Experimental Condition
Experimental Evidence
Experimental Validate Targets
Expression
Expression Profiles
External Links
Extracellular Circulating MicroRNAs
Eye
Families Data
Families Of RNA
Family
Fee-Forward Regulatory Loops
Folding
Folding Energy
Folding Parameters
Fragile Site
Fragments Of Structure
Free Energy
Function
Function Annotations
Functional Analysis
Gene
Gene ID
Gene Ontology
GeneChip
General Information
Genetic Variation
Genome Locus
Genomic Imprinted
Genus
Guide Strand Of MiRNA
HapMap Samples
Heart Development
High-throughput Sequencing
Histograms
Homology
Host Gene
Human Cancers
Ideogram
Imprinted
Imprinted Control Regions
Imprinted Transcripts
Interaction
Interactions And Processing
Intergenic Region
Intragenic
Intron Type
Intronic
Introns Fragments
Isosteres
KEGG
Ligand
Literature
Literature References
LncRNA Targets
Localization
Loci
Locus
Locus Conservation
Long RNA
Longevity
Lung
Mammalian
Mammalian MicroRNA
Metabolite
Metal Ion
Metazoan Genomes
Microbial Genomes
MicroRNAs
MicroRNA–cancer Association
MiRNA Expressions Profiles
MiRNA Families
MiRNA Pharmacogenomics Set
MiRNA Targets
Mitochondrial
Model
Model Organisms
Models
Models (3D Model)
Models Plants
Modification Sites
Modifications
Molecular Function
Motif
MRNA
MRNA Knockdown
Multivariate Analysis
Mutation
Natural Antisense Transcript
NcRNA Classification
NcRNAs From Prediction Data
Nervous Cells
Network
Next-generation Data
Next-generation Sequencing
Nomenclature Of MiRNA
Non-Canonical Base Pair
Nonconventional Binding Sites
OMIM Disorders Target
Ontology
ORF
Organ
Orientation
Orthologs
Other RNAs
Other Variant
Others
Paralogs
Paring
Pathogen
Pathway
Patient
Pattern
Perturbation
Pharmaco-miR
Pharmacogenomics
PhastCons
Phenotype
Phylogeny
Pipeline
Plant
Plant MicroRNAs
Platform
Polymorphism
Posnatal
Post-transcriptional Network
Predicted Peptides
Predicted Secondary Structure
Prediction Tools
Pri-miRNA Expression
Probe
Probe Fields
Process Function
Processes
Processing Proteins
Programmed Cell Death
Programmed Necrosis
Promoter
Promoter Regions
Protein
Protein Coding Potential
Protein Domains
Protein Knockdown
Pseudoknot
QPCR
QPCR Data
QTL
Quantitative Trait Locus
Reads
RefSeq
Regulation
Regulation Type
Regulators
Regulatory Information
Regulatory Network
Related Disease
Related Literature
Repeat
Residue
Resolution
Reverse Transcriptase
RNA Binding Proteins
RNA In Situ Hybridization
RNA Name
Sample
Secondary Structure
Self-regulation
Sense/Antisense
Sequence
Sequence And Structure
Sex Specific
Silencing Machinary
Silencing Process
Similarity
Single Nucleotide Polymorphisms
Size Classes
Small RNA Library
SNP
SNPs
Source
Spatiotemporal Distribution
Species Specific
Squamous Cell Carcinoma
Stage
Strand Bias
Stress
Structural Elements
Structure
SVM Classification
Target
Target Experimental
Target Gene
Target MiRNA
Target RNA
Target Site
Target Transcript
Targets
Taxonomy
TERT
Text Mining
Tissue
Tomato
Transcript ID
Transcript Size
Transcription
Transcription Factor
Transcription Factor Binding Site
Transcription Start Site
Transcriptional Network
Transcriptional Regulators
Transcripts
Transposable Elements
Tumor
U12-type Intron
Ultraconserved Elements
Upstream Region
Variants
Variations And Conservation And Epigenetic Modifications
Vertebrates
Viral
Web Server
Wiki
Download Type
BED
GFF
GTF
PSL
Stockholm
EMBL
FASTA
Other
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June 2018: Release 3.0