List of organisms from Rfam

A

Acidithiobacillus caldus SM-1

Acidovorax citrulli

Acidovorax ebreus

Acinetobacter baumannii LAC-4

Acinetobacter baumannii MDR-TJ

Acinetobacter baumannii TCDC-AB0715

Actinobacillus pleuropneumoniae AP76

Actinobacillus suis H91-0380

Actinoplanes sp. SE50/110

Adlercreutzia equolifaciens

Advenella kashmirensis

Aeromonas hydrophila subsp. hydrophila ATCC 7966

Agathobacter rectalis M104/1

Aggregatibacter actinomycetemcomitans D7S-1

Agrobacterium sp. H13-3

Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

Alteromonas macleodii Balearic Sea AD45

Alteromonas macleodii Black Sea 11

Anaerolinea thermophila

Anaplasma marginale Gypsy Plains

Anaplasma phagocytophilum HZ

Anoxybacillus gonensis

Arabidopsis lyrata subsp. lyrata

Arabidopsis Thaliana

Archangium gephyra

Arcobacter sp. L

Arthrobacter sp. IHBB 11108

Azospirillum thiophilum

B

Bacillus infantis

Bacillus methylotrophicus YAU B9601-Y2

Baumannia cicadellinicola Hc

Blastococcus saxobsidens

Brachypodium distachyon

Bradyrhizobium sp. ORS 278

Brassica rapa

Brassica rapa subsp. pekinensis

Brucella canis Oliveri

Buchnera aphidicola Ak

Burkholderia ambifaria MC40-6

Burkholderia sp. 2002721687

C

Cajanus cajan

Caldicellulosiruptor bescii

Caldicellulosiruptor kristjanssonii

Calditerrivibrio nitroreducens

Campylobacter insulaenigrae

Campylobacter lari RM2100

Candidatus Endolissoclinum faulkneri

Candidatus Kinetoplastibacterium oncopeltii

Candidatus Liberibacter africanus

Candidatus Nitrososphaera gargensis

Candidatus Portiera aleyrodidarum AF-CAI

Candidatus Portiera aleyrodidarum BT-QVLC

Candidatus Sodalis pierantonius

Candidatus Sulcia muelleri CARI

Candidatus Uzinura diaspidicola

Candidatus Zinderia insecticola

Cannabis sativa

Capnocytophaga sp. oral taxon 323

Carica papaya

Cedecea sp. ND14a

Chelativorans sp. BNC1

Chlamydia psittaci 02DC15

Chlamydia trachomatis A2497

Clostridium acidurici

Corynebacterium halotolerans

Corynebacterium pseudotuberculosis 267

Corynebacterium ulcerans BR-AD22

Corynebacterium ulcerans FRC11

Corynebacterium urealyticum DSM 7109

Croceibacter atlanticus

Cucumis sativus

Cyanothece sp. ATCC 51142

D

Dehalobacter sp. DCA

Dermacoccus nishinomiyaensis

Desulfobulbus propionicus

Desulfosporosinus acidiphilus

Desulfurispirillum indicum

Desulfurivibrio alkaliphilus

Desulfurobacterium thermolithotrophum

E

Ehrlichia ruminantium Gardel

Encephalitozoon intestinalis

Encephalitozoon romaleae

Endomicrobium proavitum

Ensifer adhaerens

Enterobacter aerogenes KCTC 2190

Enterobacter cloacae subsp. cloacae ENHKU01

Enterococcus faecalis OG1RF

Erwinia pyrifoliae DSM 12163

Erwinia pyrifoliae Ep1/96

Erysipelothrix rhusiopathiae Fujisawa

Erythrobacter sp. s21-N3

Escherichia albertii

Escherichia coli 55989

Escherichia coli ABU 83972

Escherichia coli B REL606

Escherichia coli BL2

Escherichia coli LF82

Escherichia coli LY180

Escherichia coli O104:H4 2009EL-2050

Escherichia coli O104:H4 2011C-3493

Escherichia coli O150:H5 SE15

Escherichia coli O157:H7 EDL933

Escherichia coli O17:K52:H18 UMN026

Escherichia coli O6:K2:H1 CFT073

Escherichia coli O7:K1 CE10

Escherichia coli O7:K1 IAI39

Escherichia coli UMNK88

Eutrema parvulum

Exiguobacterium sp. AT1b

F

Fibrella aestuarina

Flavobacterium indicum

Fragaria vesca subsp. vesca

G

Geitlerinema sp. PCC 7407

Geobacillus sp. 12AMOR1

Gilliamella apicola

Glaciecola sp. 4H-3-7+YE-5

Gluconacetobacter diazotrophicus PAl 5

Glycine Max

Granulibacter bethesdensis CGDNIH1

Granulicella mallensis

Granulicella tundricola

H

Haemophilus influenzae 10810

Haemophilus influenzae F3047

Haemophilus influenzae R2846

Haemophilus parasuis SH0165

Halanaerobium hydrogeniformans

Helicobacter pylori Puno135

Helicobacter pylori Rif1

Helicobacter pylori Rif2

Helicobacter pylori SouthAfrica7

Hoeflea sp. IMCC20628

Hordeum vulgare subsp. vulgare

Hyphomicrobium nitrativorans

J

Jatropha curcas

K

Klebsiella oxytoca E718

Klebsiella variicola At-22

L

Lactobacillus acidophilus La-14

Lactobacillus amylovorus GRL1118

Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Lactobacillus delbrueckii subsp. bulgaricus ND02

Lactobacillus gasseri ATCC 33323

Lactuca sativa

Legionella fallonii

Legionella pneumophila subsp. pneumophila Lorraine

Leptospira biflexa serovar Patoc Patoc 1

Leptospira interrogans serovar Linhai

Leptospira santarosai

Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Linum usitatissimum

Listeria ivanovii subsp. londoniensis WSLC 30151

Listeria monocytogenes EGD-e

Lotus japonicus

Lysinibacillus fusiformis

M

Malus x domestica

Medicago truncatula

Methanolacinia petrolearia

Methanotorris igneus

Methylobacterium oryzae

Methylobacterium sp. 4-46

Methylomicrobium alcaliphilum

Methylophaga nitratireducenticrescens

Micavibrio aeruginosavorus ARL-13

Micavibrio aeruginosavorus EPB

Micromonospora aurantiaca

Micromonospora sp. L5

Musa acuminata

Mycobacterium abscessus 4529

Mycobacterium abscessus DJO-44274

Mycobacterium abscessus subsp. bolletii MA 1948

Mycobacterium intracellulare ATCC 13950

Mycoplasma bovis HB0801

N

Nannospalax galili

Naumovozyma dairenensis

Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141

Nocardia nova

Nocardiopsis alba

O

Octadecabacter arcticus

Octopus bimaculoides

Olsenella sp. oral taxon 807

Ornithobacterium rhinotracheale ORT-UMN 88

Oryza brachyantha

Oryza glaberrima

Oryza sativa

Oryza sativa Indica

Oryza sativa Japonica

Oscillatoria acuminata

Oscillatoria nigro-viridis

Owenweeksia hongkongensis

P

Paenibacillus riograndensis

Pectobacterium atrosepticum SCRI1043

Pediococcus pentosaceus ATCC 25745

Phoenix dactylifera

Physcomitrella patens subsp. patens

Populus trichocarpa

Prevotella intermedia

Prochlorococcus marinus SS120

Prunus persica

Pseudomonas aeruginosa PAO1

Pseudomonas putida ND6

Pseudomonas resinovorans

Pusillimonas sp. T7-7

R

Ralstonia solanacearum FQY_4

Raoultella ornithinolytica B6

Rhodococcus erythropolis BG43

Rhodococcus opacus B4

Ricinus communis

Rickettsia prowazekii BuV67-CWPP

Rickettsia rickettsii Arizona

Riemerella anatipestifer RA-CH-2

Riemerella anatipestifer RA-GD

Rivularia sp. PCC 7116

Roseburia intestinalis M50/1

Roseobacter litoralis

Ruminococcus champanellensis

Ruminococcus sp. 80/3

Ruminococcus sp. SR1/5

Runella slithyformis

S

Salmonella enterica subsp. enterica serovar Dublin

Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078

Salmonella enterica subsp. enterica serovar Heidelberg B182

Salmonella enterica subsp. enterica serovar Typhi P-stx-12

Salmonella enterica subsp. enterica serovar Typhimurium U288

Sanguibacter keddieii

Selenomonas sputigena

Shewanella sp. MR-4

Shewanella sp. MR-7

Simiduia agarivorans

Sinorhizobium meliloti Rm41

Solanum lycopersicum

Solanum pimpinellifolium

Solanum tuberosum

Sorangium cellulosum So0157-2

Sorghum bicolor

Sphingobium chlorophenolicum

Spirochaeta thermophila DSM 6192

Spiroplasma eriocheiris

Staphylococcus aureus subsp. aureus M013

Staphylococcus aureus subsp. aureus Newman

Staphylococcus aureus subsp. aureus T0131

Streptococcus anginosus C1051

Streptococcus equi subsp. equi 4047

Streptococcus oligofermentans

Streptococcus suis 05ZYH33

Streptococcus suis P1/7

Streptococcus thermophilus JIM 8232

Streptococcus thermophilus LMD-9

Sulfobacillus acidophilus TPY

Sulfolobus islandicus L.S.2.15

Sulfolobus islandicus M.14.25

Synechococcus elongatus PCC6301

Syntrophomonas wolfei

T

Tannerella forsythia

Taylorella asinigenitalis 14/45

Taylorella equigenitalis 14/56

Terriglobus saanensis

Tetragenococcus halophilus

Thalassolituus oleivorans MIL-1

Theobroma cacao

Thermoanaerobacterium thermosaccharolyticum DSM 571

Thermodesulfobacterium geofontis

Thermus thermophilus JL-18

Thermus thermophilus SG0.5JP17-16

Treponema pallidum subsp. pallidum Nichols

Triticum aestivum

V

Vibrio anguillarum M3

Vibrio anguillarum NB10

Vitis vinifera

W

Wenzhouxiangella marina

Y

Yersinia aldovae

Yersinia aleksiciae

Yersinia pestis A1122

Yersinia pseudotuberculosis EP2/+

Yersinia pseudotuberculosis IP31758

Yersinia rohdei

Yersinia similis

Z

Zea mays