Yeast snoRNA database

RNA Type: snoRNA

Overview: The Yeast snoRNA is a database of Saccharomyces cerevisiae H/ACA and C/D box snoRNAs. This repository presents a bioinformatics package for searching rRNA nucleotide modifications in the ribosome, especially those created by small nucleolar RNA protein complexes (snoRNPs).

Search Methods:

• Keyword: search by any general term.
• Tabular: search by snoRNA or type (e.g. C/D box), target (sequence), modification sites.

Source: S. cerevisiae Genome Database, Comparative RNA Web Site, European ribosomal RNA database, PDB, LBME, GenBank, Mfold and JMol program.

Information Source: In silico annotation.

Information Content: Annotation, Conservation, Interaction, Modification sites, Processes, Sequence, Structure, Target RNA.

Reference: Piekna-Przybylska et al., 2007

PubmedID: 17283215.

Year: 2007

Multiple search: No

Download: No

Genomic Overview: No

Organism: Saccharomyces cerevisiae.

Url: http://people.biochem.umass.edu/fournierlab/snornadb/