- Search Result
- Database Details
RNA Type: snoRNA
Overview: The U12 Intron Database (U12DB) is a repository of orthologous U12-type spliceosomal introns of 20 genomes. These introns were mapped via spliced alignment of completely sequenced eukaryotic genomes and associated orthologous introns identified.
- Keyword: search by any term. Searched are restricted by the TAG options.
- TAG: search by introns, intron clusters, gene Id, Ensembl gene Id, gene name and gene description. It can also be filtered by conserved, absent, alternatively-spliced, type switch and subtype switch introns.
Source: UCSC Genome Browser, FlyBase, Ensembl, Inparanoid and Exonerate program.
Information Source: In silico annotation, Manual curation.
Information Content: Acceptor/Donor site, Annotation, Gene, Sequence, Transcripts, U12-type intron.
Reference: Alioto, 2007
Multiple search: Yes
Genomic Overview: No