RNA Type: small RNA
Overview: The Arabidopsis thaliana Small RNA Project (ASRP) is a database of small RNAs (e.g. siRNAs, tasiRNA, miRNAs, and their targets) identified from different Arabidopsis genotypes and tissues.
Search Methods:
  • Similarity: query your small sequence against the entire population of small RNA data.
  • Keyword: search by miRNA name, small RNA sequence, locus identifier.
  • TAG: search by data from experiments (e.g. Illumina or 454 sequencers).
  • Genomic Location: search by chromosome location (e.g. 1:24416..36433).
Source: In-house experiments and miRBase.
Information Source: Experimental.
Information Content: Annotation, Families data, Next-generation data, Reads, Sequence, small RNA Library, Structure, Target.
Reference: Backman et al., 2008; Gustafson et. al, 2005
PubmedID: 15608278, 17999994.
Year: 2008;2005
Multiple search: Yes
Download: GFF, FASTA, Other.
Genomic Overview: Yes
Organism: Arabidopsis Thaliana (Thale Cress).

June 2018: Release 3.0