- Search Result
- Database Details
RNA Type: NAT
Overview: The Trans-natural Sense-Antisense transcripts Map (Trans-SAMap) database is a repository specific to trans-sense/antisense (SA) pairs. The authors used an in-house pipeline to identify several trans-SA transcripts in ten organisms (human, mouse, rat, cattle, dog, chicken, zebrafish, fly, sea squirt and worm), based on transcriptional units available in NATsDB database
- Similarity: query your sequence using the BLAST program.
- Keyword: search by gene name, Trans-SA in Gene/Transcripts or mRNA/EST accession number.
- TAG: search by species.
- Tabular: search by species.
- Genomic Location: search by Trans-SA member by chromosome location.
Source: NATsDB (mRNA/EST), H-invDB, UCSC Genome Browser (Repeats), NCBI (Entrez gene, GEO, HomoloGene, SAGEMap), GO and KEGG.
Information Source: Experimental, In silico annotation.
Information Content: Annotation, EST, Evidence, Gene, mRNA, Other variant, Pattern, Sense/Antisense, Sequence, Transcripts.
Reference: Li et al., 2008
Year: 2011; 2011; 2011; 2010; 2010; 2009; 2009; 2009; 2008; 2008; 2007; 2007; 2006; 2006; 2005; 2003
Multiple search: Yes
Genomic Overview: No