- Search Result
- Database Details
RNA Type: miRNA
Overview: ZooMir is a database of homologous microRNA identified in animal genomes. A miRNA discovery pipeline was used to identify candidates for evolutionary-conserved miRNAs between 86 species. The predicted results on human, medaka and rat were experimentally validated using on deep-sequencing data.
- Tabular: search by species, class of miRNA (with miRNA and homologous data) or by evolutionary pattern information (e.g. table with the comparison between miRNAs).
Source: miRBase, UCSC Genome Bioinformatics web site, RefSeq, In house pipeline (BLAST, Srnaloop, LIBSVM for SVM classification).
Information Source: Experimental, In silico annotation.
Information Content: Animal, Class, Evolution, Homology, Orthologs, Paralogs, Pattern, Pipeline, SVM Classification.
Reference: Li et al., 2010
Multiple search: No
Genomic Overview: Yes