UCbase & miRfunc

RNA Type: miRNA

Overview: UCbase is a database of ultraconserved elements (UC) and microRNAs. It integrates ultraconserved regions and miRNAs with different human disorders.

Search Methods:

• Similarity: search sequences using the BLAST program.
• Keyword: search by the ultraconserved element number or miRNA name (e.g. uc.1A or has-mir-222) with one or multiple names and by gene name.
• TAG: search by band, human Mendelian inheritance disorders related to that band.

Source: PubMed, miRBase, UCSC Genome Browser.

Information Source: In silico annotation.

Information Content: Annotation, Disease, Expression, Ideogram, Ultraconserved elements.

Reference: Taccioli et al., 2008

PubmedID: 18945703.

Year: 2009

Multiple search: Yes

Download: Other.

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Mus musculus (House Mouse).

Url: http://microrna.osu.edu/.UCbase4/