- Search Result
- Database Details
RNA Type: miRNA
Overview: miRNAMap is a database containing microRNAs, corresponding target genes, genomic maps and expression profiles on normal and tumorous cells (microarray and qPCR). It also stores information related to both experimentally-validated and predicted microRNA target genes.
- Keyword: search by miRNA name or target gene.
- TAG: search by organism name and constraints of miRNA Target search (e.g. criteria 1 by target sites predicted by at least two tools; or criteria 2 by locates in accessible regions; and criteria 3 in target gene contains multiple target sites).
- Tabular: search by species (miRNA or target gene).
Source: miRBase, TarBase, Literature, GEO, Lu et al., 2005, Target Prediction Tools (miRanda, RNAhybrid and TargetScan), Prediction secondary structure (Sfold).
Information Source: Experimental, In silico annotation.
Information Content: Annotation, Expression, Localization, Metazoan genomes, Predicted secondary structure, qPCR data, Sequence, Structure, Target gene, Tissue, Tumor.
Reference: Hsu et al., 2008; Hsu et al., 2006
PubmedID: 16381831, 18029362.
Multiple search: Yes
Download: FASTA, Other.
Genomic Overview: No