mirGen

RNA Type: miRNA

Overview: The microRNA genomic information and regulation database (miRGen - version 2.0) is a database that integrates information from miRNAs, transcription factor binding sites, SNPs and expression profiles for human and mouse genomes.

Search Methods:

• Keyword: search by miRNA name or transcription factor (name or pattern - e.g. TATA).

Source: Corcoran et al. 2009, Landgrzf et al., 2007, Ozsolak et al., 2008, Marson et al., 2008, miRBase, Transfac/MatchTM tool, mammalian miRNA expression atlas, UCSC Genome Browser, dbSnp database, DIANA-mirPath and microT-ANN.

Information Source: Experimental, In silico annotation.

Information Content: Annotation, Annotation, Cluster, Expression, Expression profiles, Localization, Motif, Sequence, Sequence, SNP, Target gene, Tissue, Transcription Factor, Transcription Factor Binding Site.

Reference: Alexiou et al., 2010; Megraw et al., 2007

PubmedID: 17108354, 19850714.

Year: 2010;2007

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human), Mus musculus (House Mouse).

Url: http://www.microrna.gr/mirgen/