miRGator

RNA Type: miRNA

Overview: miRGator v2.0 is a database of functional annotation for microRNAs. This database includes miRNA and target gene expression data from different tissues, cell lines, disease and others experimental conditions. It also includes information on predicted target genes.

Search Methods:

• Keyword: search by miRNA name, target gene name, gene alias or Entrez Gene ID, tissue, disease, experiments, perturbation.
• TAG: search by miRNA set analysis (e.g. disease-miRNA), gene set analysis (e.g. anti-coexpressed genes, predicted targets) or miRNA expression profile.

Source: GEO, ArrayExpress, Hughes lab, Golub lab, miRBase, UCSC Genome Browser, Gene Ontology, KEGG, GenMAPP, BioCarta, Prediction target gene tools (miRanda, PicTar, TargetScanS and miBridge), PhenomiR.

Information Source: Experimental, In silico annotation.

Information Content: Binding site, Cell type, Condition, Disease, Expression, Expression, Function, Gene, Gene Ontology, mRNA, Network, Perturbation, Phenotype, Protein, Target gene, Tissue.

Reference: Cho et al., 2010; Nam et al., 2007

PubmedID: 17942429, 21062822.

Year: 2011;2008

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human).

Url: http://mirgator.kobic.re.kr/