miRDB

RNA Type: miRNA

Overview: miRDB is a database of miRNA target predictions and functional annotations. There is a wiki editing interface that allows anyone to contribute on miRNA functional annotation. Genome-wide target prediction is based using an in-house algorithm (Wang and El Naqa 2008).

Search Methods:

• Keyword: search by multiple miRNA or gene names.
• TAG: search by species, or target gene id (GenBank accession, NCBI Gene ID or Gene Symbol.
• Tabular: search by pathway (miRNA regulators).

Source: miRBase, Genbank, PANTHER, Author’s target prediction tool (Wang and El Naqa 2008), Liang et al., 2007.

Information Source: Experimental, In silico annotation.

Information Content: Annotation, Gene, Pathway, Sequence, Structure, Target gene.

Reference: Wang, 2008

PubmedID: 18426918.

Year: 2008

Multiple search: Yes

Download: Other.

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Canis familiaris (Dog), Mus musculus (House Mouse), Gallus gallus (Chicken).

Url: http://www.mirdb.org/