- Search Result
- Database Details
RNA Type: miRNA
Overview: MicroPC is a database of miRNA and their targets in plant genomes, obtained from literature and EST data analysis. MicroPC displays comparative views of miRNAs in different plant species and also predicts potential targets from miRNA input.
- Similarity: search sequences usingthe BLAST program against MicroPC data.
- Keyword: search by miRNA name/AC (e.g. MIMAT0000166) or ID (e.g. ath-miR156a) or sequence (in miRNA search); miRNA name or UniProt accession number (in Target search);
- TAG: search by Plant species (in miRNA/Target search) and Gene Ontology (in Target search).
Source: miRBase, PlantGDB, Rfam, UniProtKB/Swiss-Prot/TrEMBL, secondary structure predictions with UNAFold.
Information Source: Experimental, In silico annotation, Manual curation.
Information Content: Annotation, Conservation, Gene Ontology, Plant, Predicted secondary structure, Sequence, Structure, Target gene.
Reference: Mhuantong and Wichadakul, 2009
Multiple search: Yes
Download: FASTA, Other.
Genomic Overview: No