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NRDR - The Non-coding RNA Databases Resource


Database version: 2014
RNA Type: Long RNA
Overview: lnCeDB provides a database of human lncRNAs that can potentially act as ceRNAs (competing endogenous RNA). The mRNA targets of human miRNAs are predicted by Targetscan and mapped to par-clip data (downloaded from StarBase). The lncRNA targets of human miRNAare downloaded from miRCode database.
Search Methods:
  • Keyword: Search by lncRNA name, ENSEMBL Gene ID or ENSEMBL Transcript ID; Search by competing miRNA name
  • Tabular: Browse for lncRNA-mRNA pairs having common targeting miRNAs,
Source: GENCODE, StarBase, miRCode, literature
Information Source: Experimental, In silico annotation.
Information Content: .
Reference: Das et al. 2014. PLOS One. (6):e98965.
PubmedID: 24926662.
Year: 2014
Multiple search: Yes
Download: Other.
Genomic Overview: No
Organism: Homo sapiens (Human).

Url: http://gyanxet-beta.com/lncedb/
June 2018: Release 3.0