HOCTARdb

RNA Type: miRNA

Overview: Host gene Opposite Correlated TARgets (HOCTARdb) is a database of intragenic microRNAs and their target genes in the human genome. It stores information for all 290 miRNAs analyzed by the HOCTAR tool for target prediction.

Search Methods:

• Keyword: search by target gene name.
• TAG: search by microRNA name.

Source: miRBase, NCBI GEO (microarray dataset), Target Prediction Tool (PicTar, TargetScan and miRanda), GO tool analysis (DAVID web-tool).

Information Source: Experimental, In silico annotation, Manual curation.

Information Content: Expression, Expression profiles, Gene, Gene Ontology, Intragenic, Target gene.

Reference: Gennarino et al., 2011

PubmedID: 21435384.

Year: 2011

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human).

Url: http://hoctar.tigem.it/