Warning: implode(): Invalid arguments passed in /var/www/html/models/ncrnaMain.php on line 360
NRDR - The Non-coding RNA Databases Resource


Database version: v1.1
RNA Type: miRNA
Overview: miRNA Pathway Dictionary Database (miRPathDB) aims to augment available target pathway web-servers by providing researches easy access to the information which pathways are regulated by a miRNA, which miRNAs target a pathway and how specific the regulations are. The database contains a large number of miRNAs (2,599 human miRNAs), different miRNA target sets (14,773 experimentally validated target genes as well as 19281 predicted targets genes) and a broad selection of functional biochemical categories (280 KEGG-, 296 WikiPathways-, 310 BioCarta-, 617 SMPDB-, 221 PID-, 1,300 Reactome pathways, 6,169 biological processes, 1,550 molecular functions, and 758 cellular components from Gene Ontology, and 806 cytogenetic bands, totaling 12,875 categories). In addition to H. sapiens, also M. musculus data are stored and can be compared to human target pathways.
Search Methods:
  • Keyword: Search by microRNA or pathway name
  • Tabular: Browser through miRNAs or pathways lists
  • TAG: TAG search is available to select the pathway database of interest
Source: KEGG, WikiPathways, BioCarta, SMPDB, PID, Reactome, Gene Ontology, miRBase, DIANA-microT, miRDB, TargetScan, miRTarBase, GeneTrail2, Small Molecule Pathway Database
Information Source: Experimental, In silico annotation.
Information Content: .
Reference: Backes et al. 2017. Nucleic Acids Research. 45(D1):D90-D96.
PubmedID: 27742822.
Year: 2017
Multiple search: No
Download: Other.
Genomic Overview: No
Organism: Homo sapiens (Human), Mus musculus (House Mouse).

Url: https://mpd.bioinf.uni-sb.de/overview.html
June 2018: Release 3.0