RiceATM

Database version: 2015

RNA Type: miRNA

Overview: RiceATM integrates 329 miRNA expression profiles using microarray and 8 agronomic traits associated with rice yield in 187 Taiwan rice cultivars. The database allows users to obtain the significant miRNAs associated with specific agronomic trait as biomarkers for breeding or further functional studies.

Search Methods:

• Similarity: BLAST searches against stored miRNAs
• TAG: TAG search according to the plant phenotype or the microRNA of interest

Source: Microarray expression profiles, miRBase, miRanda, psRNATarget

Information Source: Experimental, In silico annotation.

Information Content: .

Reference: Liu et al. 2016. Database. 2016. pii: baw15

PubmedID: 28025342.

Year: 2016

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Oryza sativa (Rice).

Url: http://syslab3.nchu.edu.tw/rice/