ExprTargetDB

RNA Type: miRNA

Overview: ExprTargetDB is a catalogue of miRNA-targets and expression information extracted from an integration of computational and experimental approaches. This database has also miRNA target gene relationship based on HapMap samples.

Search Methods:

• Keyword: search by gene or miRNA name.
• TAG: search by prediction algorithm.

Source: HapMap (LCL - Lymphoblastoid Cell Lines), experimental data on miRNA expression and target genes (Affymetrix Human Exon array, miRNeasy Qiagen Kit etc), Target Prediction Tools (miRanda, Target Scan and PicTar), TarBase, In house analysis (R scripts etc), ExprTarget Tool.

Information Source: Experimental, In silico annotation.

Information Content: Expression, HapMap samples, Target experimental, Target gene.

Reference: Gamazon et al., 2010

PubmedID: 20975837.

Year: 2010

Multiple search: Yes

Download: Other.

Genomic Overview: No

Organism: Homo sapiens (Human).

Url: http://www.scandb.org/apps/microrna/