miRGate

Database version: 2015

RNA Type: miRNA

Overview: miRGate is a curated database of human, mouse and rat miRNAs/mRNAs targets. It is designed to analyze miRNA and gene isoforms lists under a common and consistent space of annotations. Including all existing 3 UTR and the entirely known miRNAs. All Havana biotypes and ENCODE principal isoforms for the three organisms are also included.

Search Methods:

• Keyword: Search by microRNA name or gene name after a set of selections using a TAG search
• TAG: TAG selection of the species name; followed by a TAG selection of the genes, miRNAs or both; and a definition of a reference database for ID usage

Source: Havana, ENCODE, ENSEMBL, Miranda, Pita, RNAHybrid, Microtar, TargetScan, miRBase, Tarbase, miRTarbase, miRecords, OncomirDB, UCSC PhastCons

Information Source: In silico annotation.

Information Content: .

Reference: Andrés-León et al. 2015. miRGate: a curated database of human, mouse and rat miRNA-mRNA targets. Database. 2015:bav035

PubmedID: 25858286.

Year: 2015

Multiple search: No

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human), Rattus norvegicus (Norway Rat), Mus musculus (House Mouse).

Url: http://mirgate.bioinfo.cnio.es/miRGate/