ceRDB

Database version: 2012

RNA Type: miRNA

Overview: Recently it has been established that miRNA activity on the target gene can be influenced by the presence or absence of other competing endogenous (ceRNA) mRNAs that contain shared MREs. These miRNA activity modulators can act as a sponge, absorbing and releasing miRNA based on the level of the transcript. The competing endogenous RNA database (ceRDB), lists potential MRE containing genes that can act in a sponge like fashion for a given mRNA based on a set of scoring and ranking criteria.

Search Methods:

• TAG: TAG search using the target gene name

Source: TargetScan, Gene Cluster

Information Source: In silico annotation.

Information Content: .

Reference: Sarver and Subramanian. 2012. Competing endogenous RNA database. Bioinformation. 8(15): 731–733.

PubmedID: 23055620.

Year: 2012

Multiple search: No

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human).

Url: http://www.oncomir.umn.edu/cefinder/