dbSMR

RNA Type: miRNA

Overview: Database of SNPs affecting miR Regulation (dbSMR) is a database of predicted and validated miRNA binding sites (within 200 nucleotides) and correlated SNPs in human genome.

Search Methods:

• Keyword: search by SNP id, target transcript id, target gene name, and miRNA name.
• TAG: target gene name or miRNA name.

Source: Ensembl, miRBase, TarBase, HapMap Phase II (Haplotter website), Target Prediction Tool (miRanda, RNAHybrid, TargetScan), Prediction secondary structure (RNAfold)

Information Source: In silico annotation.

Information Content: Binding site, Gene, Polymorphism, Predicted secondary structure, SNP, Target gene, Target transcript.

Reference: Hariharan et al., 2009.2009

PubmedID: 19371411.

Year: 2009

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Homo sapiens (Human).

Url: http://miracle.igib.res.in/polyreg/