SRD

Database version: November 2017

RNA Type: Multiple classes

Overview: The “Staphylococcal Regulatory RNA Database” compiled all published data in a single interface including genetic locations, sequences and other features for several Staphylococcal species.

Search Methods:

• Similarity: BLAST searches against stored RNAs
• Tabular: Browse the list of RNAs according to all Staphylococcal species

Source: Literature, Northern Blot, 5′ and 3′ RACE, RT-qPCR, RNA-seq

Information Source: Experimental, In silico annotation.

Information Content: .

Reference: Sassi et al. 2015. SRD: a Staphylococcus regulatory RNA database. RNA. 21(5):1005-17.

PubmedID: 25805861.

Year: 2015

Multiple search: No

Download: FASTA.

Genomic Overview: No

Organism: Staphylococcus haemolyticus JCSC1435, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis ATCC 12228, Staphylococcus aureus RF122, , Staphylococcus lugdunensis HKU09-01, Staphylococcus pasteuri SP1, Staphylococcus pseudintermedius ED99, Staphylococcus warneri SG1, Staphylococcus aureus MSSA476, Staphylococcus aureus str 502A, Staphylococcus aureus str M1, Staphylococcus aureus str NRS100, Staphylococcus aureus str XN108, Staphylococcus aureus subsp aureus str COL and 13 others.

Url: http://srd.genouest.org