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NRDR - The Non-coding RNA Databases Resource


Database version: 2016
RNA Type: Long RNA
Overview: PeTMbase aims to provide a resource for endogenous miRNA target (eMTs) mimics RNAs for plants. eMTs are a new type of long non-coding RNAs (lncRNAs), which bind to the corresponding miRNAs to block the binding of specific transcript leading to increase mRNA expression.
Search Methods:
  • Keyword: Keyword search by microRNA name
  • TAG: TAG selection of the species name
Source: Sequences predicted computationally
Information Source: In silico annotation.
Information Content: .
Reference: Karakülah G, Yücebilgili Kurtoğlu K, Unver T (2016) PeTMbase: A Database of Plant Endogenous Target Mimics (eTMs). PLoS ONE 11(12): e0167698.
PubmedID: 27936097.
Year: 2016
Multiple search: No
Download: Other.
Genomic Overview: No
Organism: Glycine Max (Soybean), Medicago truncatula (Barrel Medic), Oryza sativa (Rice), Populus trichocarpa, Solanum lycopersicum (Tomato ), Brachypodium distachyon, Hordeum vulgare, Sorghum bicolor (Sorghum), Triticum aestivum (Bread wheat), Aabidopsis thaliana.

Url: http://petmbase.org
June 2018: Release 3.0