RNAiAtlas

RNA Type: siRNA

Overview: The RNAiAtlas has been created for exploration, analysis and distribution of large scale RNAi libraries (currently limited to the human genome) with their latest annotation (including former history) but in addition it contains also specific on-target analysis results (design quality, side effects, off-targets).

Search Methods:

• Keyword: search by Gene symbol, Gene id or Sirna id.
• Similarity: search by siRNA Sequence
• TAG: search by annotation year or library attributes

Source: The database integrates the information of the siRNA reagents from three human genome-wide libraries

Information Source: Experimental.

Information Content: Annotation, Silencing machinary, Silencing process, Target, Target RNA.

Reference: Mazur S., Csucs G., Kozak K., 2012. RNAiAtlas: a database for RNAi (siRNA) libraries and their specificity. Database (Oxford) 2012: bas027. [PMC free article] [PubMed]

PubmedID: 22700939.

Year: 2012

Multiple search: Yes

Download: No

Genomic Overview: Yes

Organism: Homo sapiens (Human).

Url: http://www.rnaiatlas.ethz.ch