Ssa miRNAs DB

RNA Type: miRNA

Overview: Ssa miRNAs DB is a bioinformatics and manually curated database that aims to provide a comprehensive resource of microRNAs in Altantic salmon, with a user friendly interface for a convenient retrieval of each entry by microRNA ID or target gene. The current version of Ssa miRNAs DB involved the prediction of 41 and 266 homologous-based and novel microRNAs, respectively.

Search Methods:

• Keyword: Using the microRNA name, GenBank accession number or any free keyword

Source: Unigene database of GenBank (http://www.ncbi.nlm.nih.gov/unigene), Gene Index (http://compbio.dfci.harvard.edu/tgi/), GRASP (http://web.uvic.ca/grasp/), miRBase (http://www.mirbase.org).

Information Source: In silico annotation, In silico annotation.

Information Content: Localization, microRNAs, Target, Target gene.

Reference: Reyes et al

PubmedID: 22493538.

Year: 2012

Multiple search: Yes

Download: No

Genomic Overview: No

Organism: Salmo salar.

Url: http://www.molgenv.com/ssa_mirnas_db_home.php