lncRNome

RNA Type: Long RNA

Overview: lncRNome is a comprehensive database for long non-coding RNAs in human. It has information related to over 1700 lncRNAs, with information related to chromosomal locations, biological functions, disease associations and protein-lncRNA interactions

Search Methods:

• Keyword: lncRNA names, Emsembl IDs, known targets, SNPs, diseases or any keyword term.
• Similarity: search using the patterns Emsembl or HGNC.
• TAG: search by lncRNA name.

Source: Gencode, lncRNAdb, Ensembl, HGNC, Deepbase and NCBI.

Information Source: Experimental, In silico annotation, In silico annotation.

Information Content: General Information, Interactions and Processing, predicted peptides, Sequence and Structure, Variations and Conservation and Epigenetic Modifications.

Reference: Bhartiya,D., Pal,K., Ghosh,S., et al. 2013

PubmedID: 23846593.

Year: 2013

Multiple search: Yes

Download: FASTA, Other.

Genomic Overview: Yes

Organism: Homo sapiens (Human).

Url: http://genome.igib.res.in/lncRNome