- Search Result
- Database Details
RNA Type: miRNA
Overview: doRiNA is a database focused in post-transcriptional regulation which integrates information related to biding site data between RNA biding proteins (RBPs) and microRNAs.
- Similarity: search sequences using the BLAT program.
- Keyword: search by Gene Symbol, NCBI RefSeq.
- TAG: search by clade, genome, assembly, Gene Symbol, NCBI RefSeq or regulators (RBPs and/or miRNAs)
Source: In-house experiments (e.g. PAR-CLIP) and literature experiments (e.g. HITS-CLIP, Hafner et al. 2010 - Reference 11), Tools (e.g. PicTar), UCSC Genome Browser, miRBase v16
Information Source: Experimental, In silico annotation, In silico annotation.
Information Content: Annotation, Binding site, Prediction tools, RNA binding proteins, Target gene.
Reference: Anders et al., 2011
Multiple search: Yes
Genomic Overview: Yes